Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC9.78□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC9.78□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC9.78□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC9.78□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Trav9n-2A0A0G2JDP3 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC9.78□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC9.78□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC9.78□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Mir7684-201ENSMUST00000183858 60 ntBASIC9.78□□□□□ -0.84
Trav9n-2A0A0G2JDP3 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC9.78□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav9n-2A0A0G2JDP3 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav9n-2A0A0G2JDP3 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC9.78□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC9.78□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC9.78□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC9.78□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Gm37015-201ENSMUST00000192763 1521 ntBASIC9.77□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC9.77□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav9n-2A0A0G2JDP3 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
Trav9n-2A0A0G2JDP3 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav9n-2A0A0G2JDP3 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav9n-2A0A0G2JDP3 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav9n-2A0A0G2JDP3 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav9n-2A0A0G2JDP3 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav9n-2A0A0G2JDP3 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Trav9n-2A0A0G2JDP3 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC9.77□□□□□ -0.85
Trav9n-2A0A0G2JDP3 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC9.77□□□□□ -0.85
Trav9n-2A0A0G2JDP3 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC9.77□□□□□ -0.85
Trav9n-2A0A0G2JDP3 Gm15240-201ENSMUST00000118156 720 ntBASIC9.77□□□□□ -0.85
Trav9n-2A0A0G2JDP3 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC9.77□□□□□ -0.85
Trav9n-2A0A0G2JDP3 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav9n-2A0A0G2JDP3 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC9.77□□□□□ -0.85
Trav9n-2A0A0G2JDP3 Gm27838-201ENSMUST00000184829 128 ntBASIC9.77□□□□□ -0.85
Trav9n-2A0A0G2JDP3 Mir7023-201ENSMUST00000185093 64 ntBASIC9.77□□□□□ -0.85
Trav9n-2A0A0G2JDP3 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC9.77□□□□□ -0.85
Trav9n-2A0A0G2JDP3 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC9.77□□□□□ -0.85
Trav9n-2A0A0G2JDP3 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav9n-2A0A0G2JDP3 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav9n-2A0A0G2JDP3 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav9n-2A0A0G2JDP3 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
Trav9n-2A0A0G2JDP3 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
Trav9n-2A0A0G2JDP3 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav9n-2A0A0G2JDP3 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC9.77□□□□□ -0.85
Trav9n-2A0A0G2JDP3 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav9n-2A0A0G2JDP3 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav9n-2A0A0G2JDP3 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav9n-2A0A0G2JDP3 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav9n-2A0A0G2JDP3 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav9n-2A0A0G2JDP3 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav9n-2A0A0G2JDP3 Gm6263-201ENSMUST00000120029 1342 ntBASIC9.77□□□□□ -0.85
Trav9n-2A0A0G2JDP3 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav9n-2A0A0G2JDP3 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav9n-2A0A0G2JDP3 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Trav9n-2A0A0G2JDP3 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav9n-2A0A0G2JDP3 AC161252.3-201ENSMUST00000225465 1549 ntBASIC9.77□□□□□ -0.85
Trav9n-2A0A0G2JDP3 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav9n-2A0A0G2JDP3 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav9n-2A0A0G2JDP3 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Trav9n-2A0A0G2JDP3 Gm43364-201ENSMUST00000196046 3274 ntBASIC9.76□□□□□ -0.85
Trav9n-2A0A0G2JDP3 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC9.76□□□□□ -0.85
Trav9n-2A0A0G2JDP3 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav9n-2A0A0G2JDP3 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav9n-2A0A0G2JDP3 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav9n-2A0A0G2JDP3 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC9.76□□□□□ -0.85
Trav9n-2A0A0G2JDP3 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Trav9n-2A0A0G2JDP3 AC168058.1-201ENSMUST00000219521 2282 ntBASIC9.76□□□□□ -0.85
Trav9n-2A0A0G2JDP3 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav9n-2A0A0G2JDP3 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav9n-2A0A0G2JDP3 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC9.76□□□□□ -0.85
Trav9n-2A0A0G2JDP3 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms