Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC10.05□□□□□ -0.8
Trav6n-6A0A075B6B2 Gm7774-201ENSMUST00000200064 533 ntBASIC10.05□□□□□ -0.8
Trav6n-6A0A075B6B2 Gm45242-201ENSMUST00000210666 2129 ntBASIC10.05□□□□□ -0.8
Trav6n-6A0A075B6B2 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC10.05□□□□□ -0.8
Trav6n-6A0A075B6B2 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
Trav6n-6A0A075B6B2 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav6n-6A0A075B6B2 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Trav6n-6A0A075B6B2 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC10.05□□□□□ -0.8
Trav6n-6A0A075B6B2 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav6n-6A0A075B6B2 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC10.05□□□□□ -0.8
Trav6n-6A0A075B6B2 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav6n-6A0A075B6B2 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav6n-6A0A075B6B2 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Trav6n-6A0A075B6B2 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav6n-6A0A075B6B2 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav6n-6A0A075B6B2 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav6n-6A0A075B6B2 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Trav6n-6A0A075B6B2 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Trav6n-6A0A075B6B2 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav6n-6A0A075B6B2 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Trav6n-6A0A075B6B2 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Trav6n-6A0A075B6B2 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav6n-6A0A075B6B2 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav6n-6A0A075B6B2 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC10.04□□□□□ -0.8
Trav6n-6A0A075B6B2 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Trav6n-6A0A075B6B2 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav6n-6A0A075B6B2 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav6n-6A0A075B6B2 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav6n-6A0A075B6B2 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav6n-6A0A075B6B2 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav6n-6A0A075B6B2 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Trav6n-6A0A075B6B2 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav6n-6A0A075B6B2 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav6n-6A0A075B6B2 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Trav6n-6A0A075B6B2 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav6n-6A0A075B6B2 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Trav6n-6A0A075B6B2 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav6n-6A0A075B6B2 Matn2-203ENSMUST00000226766 3252 ntBASIC10.04□□□□□ -0.8
Trav6n-6A0A075B6B2 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav6n-6A0A075B6B2 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC10.04□□□□□ -0.8
Trav6n-6A0A075B6B2 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC10.04□□□□□ -0.8
Trav6n-6A0A075B6B2 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC10.04□□□□□ -0.8
Trav6n-6A0A075B6B2 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC10.04□□□□□ -0.8
Trav6n-6A0A075B6B2 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC10.04□□□□□ -0.8
Trav6n-6A0A075B6B2 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC10.04□□□□□ -0.8
Trav6n-6A0A075B6B2 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC10.04□□□□□ -0.8
Trav6n-6A0A075B6B2 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC10.04□□□□□ -0.8
Trav6n-6A0A075B6B2 Gm37171-201ENSMUST00000192636 1185 ntBASIC10.04□□□□□ -0.8
Trav6n-6A0A075B6B2 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC10.04□□□□□ -0.8
Trav6n-6A0A075B6B2 AC158529.1-201ENSMUST00000223618 239 ntBASIC10.04□□□□□ -0.8
Trav6n-6A0A075B6B2 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav6n-6A0A075B6B2 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav6n-6A0A075B6B2 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Trav6n-6A0A075B6B2 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav6n-6A0A075B6B2 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav6n-6A0A075B6B2 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Trav6n-6A0A075B6B2 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav6n-6A0A075B6B2 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC10.04□□□□□ -0.8
Trav6n-6A0A075B6B2 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav6n-6A0A075B6B2 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Trav6n-6A0A075B6B2 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav6n-6A0A075B6B2 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Trav6n-6A0A075B6B2 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Trav6n-6A0A075B6B2 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav6n-6A0A075B6B2 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav6n-6A0A075B6B2 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC10.04□□□□□ -0.8
Trav6n-6A0A075B6B2 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav6n-6A0A075B6B2 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav6n-6A0A075B6B2 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav6n-6A0A075B6B2 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Trav6n-6A0A075B6B2 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav6n-6A0A075B6B2 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav6n-6A0A075B6B2 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav6n-6A0A075B6B2 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav6n-6A0A075B6B2 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav6n-6A0A075B6B2 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav6n-6A0A075B6B2 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav6n-6A0A075B6B2 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav6n-6A0A075B6B2 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav6n-6A0A075B6B2 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC10.03□□□□□ -0.8
Trav6n-6A0A075B6B2 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Trav6n-6A0A075B6B2 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav6n-6A0A075B6B2 Gm8116-201ENSMUST00000182917 1201 ntBASIC10.03□□□□□ -0.8
Trav6n-6A0A075B6B2 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC10.03□□□□□ -0.8
Trav6n-6A0A075B6B2 AC124732.2-201ENSMUST00000221977 316 ntBASIC10.03□□□□□ -0.8
Trav6n-6A0A075B6B2 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav6n-6A0A075B6B2 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav6n-6A0A075B6B2 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav6n-6A0A075B6B2 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC10.03□□□□□ -0.8
Trav6n-6A0A075B6B2 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav6n-6A0A075B6B2 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav6n-6A0A075B6B2 Gm38385-201ENSMUST00000194454 2351 ntBASIC10.03□□□□□ -0.8
Trav6n-6A0A075B6B2 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Trav6n-6A0A075B6B2 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav6n-6A0A075B6B2 Tcf21-202ENSMUST00000218002 1788 ntBASIC10.03□□□□□ -0.8
Trav6n-6A0A075B6B2 Gm9252-201ENSMUST00000172364 1602 ntBASIC10.03□□□□□ -0.8
Trav6n-6A0A075B6B2 Gm13517-201ENSMUST00000120782 1495 ntBASIC10.03□□□□□ -0.8
Trav6n-6A0A075B6B2 CT025626.1-201ENSMUST00000223735 1455 ntBASIC10.03□□□□□ -0.8
Trav6n-6A0A075B6B2 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC10.03□□□□□ -0.8
Trav6n-6A0A075B6B2 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 110 ms