Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Trav5-4A0A075B652 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav5-4A0A075B652 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC11.29□□□□□ -0.6
Trav5-4A0A075B652 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trav5-4A0A075B652 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav5-4A0A075B652 Pck2-205ENSMUST00000226352 2784 ntBASIC11.28□□□□□ -0.6
Trav5-4A0A075B652 Grk6-205ENSMUST00000224653 2976 ntBASIC11.28□□□□□ -0.6
Trav5-4A0A075B652 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav5-4A0A075B652 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav5-4A0A075B652 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav5-4A0A075B652 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav5-4A0A075B652 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Trav5-4A0A075B652 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav5-4A0A075B652 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav5-4A0A075B652 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Trav5-4A0A075B652 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav5-4A0A075B652 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Trav5-4A0A075B652 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Trav5-4A0A075B652 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trav5-4A0A075B652 Gm11557-201ENSMUST00000120200 1008 ntBASIC11.28□□□□□ -0.6
Trav5-4A0A075B652 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC11.28□□□□□ -0.6
Trav5-4A0A075B652 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC11.28□□□□□ -0.6
Trav5-4A0A075B652 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC11.28□□□□□ -0.6
Trav5-4A0A075B652 Gm8927-201ENSMUST00000181978 981 ntBASIC11.28□□□□□ -0.6
Trav5-4A0A075B652 Gm27618-201ENSMUST00000183671 60 ntBASIC11.28□□□□□ -0.6
Trav5-4A0A075B652 Gm17837-201ENSMUST00000186435 985 ntBASIC11.28□□□□□ -0.6
Trav5-4A0A075B652 Gm44344-201ENSMUST00000200287 129 ntBASIC11.28□□□□□ -0.6
Trav5-4A0A075B652 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC11.28□□□□□ -0.6
Trav5-4A0A075B652 Gm4971-201ENSMUST00000205991 1108 ntBASIC11.28□□□□□ -0.6
Trav5-4A0A075B652 Gm6888-201ENSMUST00000221983 706 ntBASIC11.28□□□□□ -0.6
Trav5-4A0A075B652 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Trav5-4A0A075B652 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav5-4A0A075B652 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav5-4A0A075B652 Gm3222-201ENSMUST00000071282 990 ntBASIC11.28□□□□□ -0.6
Trav5-4A0A075B652 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Trav5-4A0A075B652 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav5-4A0A075B652 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav5-4A0A075B652 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav5-4A0A075B652 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav5-4A0A075B652 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav5-4A0A075B652 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav5-4A0A075B652 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav5-4A0A075B652 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav5-4A0A075B652 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav5-4A0A075B652 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav5-4A0A075B652 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav5-4A0A075B652 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav5-4A0A075B652 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Trav5-4A0A075B652 CT025678.1-201ENSMUST00000214795 2972 ntBASIC11.28□□□□□ -0.6
Trav5-4A0A075B652 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav5-4A0A075B652 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav5-4A0A075B652 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav5-4A0A075B652 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Trav5-4A0A075B652 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
Trav5-4A0A075B652 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trav5-4A0A075B652 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Trav5-4A0A075B652 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Trav5-4A0A075B652 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Trav5-4A0A075B652 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trav5-4A0A075B652 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
Trav5-4A0A075B652 Nudt18-202ENSMUST00000228554 3619 ntBASIC11.27□□□□□ -0.6
Trav5-4A0A075B652 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trav5-4A0A075B652 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trav5-4A0A075B652 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Trav5-4A0A075B652 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trav5-4A0A075B652 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav5-4A0A075B652 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav5-4A0A075B652 AC164426.2-201ENSMUST00000225993 2492 ntBASIC11.27□□□□□ -0.61
Trav5-4A0A075B652 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Trav5-4A0A075B652 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav5-4A0A075B652 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trav5-4A0A075B652 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Trav5-4A0A075B652 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC11.27□□□□□ -0.61
Trav5-4A0A075B652 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
Trav5-4A0A075B652 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trav5-4A0A075B652 Gm4804-201ENSMUST00000182234 999 ntBASIC11.27□□□□□ -0.61
Trav5-4A0A075B652 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trav5-4A0A075B652 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Trav5-4A0A075B652 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
Trav5-4A0A075B652 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trav5-4A0A075B652 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC11.27□□□□□ -0.61
Trav5-4A0A075B652 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC11.27□□□□□ -0.61
Trav5-4A0A075B652 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav5-4A0A075B652 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav5-4A0A075B652 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav5-4A0A075B652 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trav5-4A0A075B652 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trav5-4A0A075B652 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav5-4A0A075B652 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Trav5-4A0A075B652 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav5-4A0A075B652 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav5-4A0A075B652 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav5-4A0A075B652 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC11.27□□□□□ -0.61
Trav5-4A0A075B652 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav5-4A0A075B652 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trav5-4A0A075B652 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav5-4A0A075B652 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav5-4A0A075B652 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav5-4A0A075B652 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav5-4A0A075B652 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms