Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
H2afb2S4R1M3 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
H2afb2S4R1M3 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
H2afb2S4R1M3 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC21.48■■□□□ 1.03
H2afb2S4R1M3 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
H2afb2S4R1M3 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
H2afb2S4R1M3 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
H2afb2S4R1M3 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC21.48■■□□□ 1.03
H2afb2S4R1M3 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
H2afb2S4R1M3 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
H2afb2S4R1M3 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
H2afb2S4R1M3 Gm10420-201ENSMUST00000121713 882 ntBASIC21.47■■□□□ 1.03
H2afb2S4R1M3 Gm43592-201ENSMUST00000196922 1165 ntBASIC21.47■■□□□ 1.03
H2afb2S4R1M3 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC21.47■■□□□ 1.03
H2afb2S4R1M3 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
H2afb2S4R1M3 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
H2afb2S4R1M3 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
H2afb2S4R1M3 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
H2afb2S4R1M3 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC21.46■■□□□ 1.03
H2afb2S4R1M3 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC21.46■■□□□ 1.03
H2afb2S4R1M3 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC21.46■■□□□ 1.03
H2afb2S4R1M3 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
H2afb2S4R1M3 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC21.46■■□□□ 1.03
H2afb2S4R1M3 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
H2afb2S4R1M3 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
H2afb2S4R1M3 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC21.45■■□□□ 1.02
H2afb2S4R1M3 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
H2afb2S4R1M3 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC21.45■■□□□ 1.02
H2afb2S4R1M3 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
H2afb2S4R1M3 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
H2afb2S4R1M3 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC21.44■■□□□ 1.02
H2afb2S4R1M3 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC21.44■■□□□ 1.02
H2afb2S4R1M3 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
H2afb2S4R1M3 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
H2afb2S4R1M3 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
H2afb2S4R1M3 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
H2afb2S4R1M3 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
H2afb2S4R1M3 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
H2afb2S4R1M3 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
H2afb2S4R1M3 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
H2afb2S4R1M3 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
H2afb2S4R1M3 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
H2afb2S4R1M3 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
H2afb2S4R1M3 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
H2afb2S4R1M3 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
H2afb2S4R1M3 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
H2afb2S4R1M3 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
H2afb2S4R1M3 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
H2afb2S4R1M3 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
H2afb2S4R1M3 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC21.42■■□□□ 1.02
H2afb2S4R1M3 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
H2afb2S4R1M3 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC21.42■■□□□ 1.02
H2afb2S4R1M3 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
H2afb2S4R1M3 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
H2afb2S4R1M3 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
H2afb2S4R1M3 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC21.41■■□□□ 1.02
H2afb2S4R1M3 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
H2afb2S4R1M3 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
H2afb2S4R1M3 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
H2afb2S4R1M3 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
H2afb2S4R1M3 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
H2afb2S4R1M3 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC21.4■■□□□ 1.02
H2afb2S4R1M3 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
H2afb2S4R1M3 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC21.4■■□□□ 1.02
H2afb2S4R1M3 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
H2afb2S4R1M3 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
H2afb2S4R1M3 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
H2afb2S4R1M3 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
H2afb2S4R1M3 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
H2afb2S4R1M3 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
H2afb2S4R1M3 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC21.39■■□□□ 1.01
H2afb2S4R1M3 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
H2afb2S4R1M3 Cap2-205ENSMUST00000225824 1634 ntBASIC21.39■■□□□ 1.01
H2afb2S4R1M3 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
H2afb2S4R1M3 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC21.39■■□□□ 1.01
H2afb2S4R1M3 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
H2afb2S4R1M3 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
H2afb2S4R1M3 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
H2afb2S4R1M3 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
H2afb2S4R1M3 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
H2afb2S4R1M3 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
H2afb2S4R1M3 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
H2afb2S4R1M3 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
H2afb2S4R1M3 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
H2afb2S4R1M3 Dmtn-209ENSMUST00000228295 2572 ntBASIC21.38■■□□□ 1.01
H2afb2S4R1M3 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
H2afb2S4R1M3 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
H2afb2S4R1M3 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
H2afb2S4R1M3 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
H2afb2S4R1M3 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC21.37■■□□□ 1.01
H2afb2S4R1M3 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
H2afb2S4R1M3 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
H2afb2S4R1M3 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
H2afb2S4R1M3 Gm5067-201ENSMUST00000170449 1009 ntBASIC21.36■■□□□ 1.01
H2afb2S4R1M3 Nsd1-206ENSMUST00000224918 1001 ntBASIC21.36■■□□□ 1.01
H2afb2S4R1M3 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
H2afb2S4R1M3 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
H2afb2S4R1M3 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC21.36■■□□□ 1.01
H2afb2S4R1M3 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC21.36■■□□□ 1.01
H2afb2S4R1M3 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms