Protein–RNA interactions for Protein: Q9WUB6

Clcnkb, Chloride channel protein ClC-Kb, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkbQ9WUB6 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
ClcnkbQ9WUB6 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
ClcnkbQ9WUB6 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC21.21■□□□□ 0.99
ClcnkbQ9WUB6 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
ClcnkbQ9WUB6 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.99
ClcnkbQ9WUB6 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC21.2■□□□□ 0.98
ClcnkbQ9WUB6 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ClcnkbQ9WUB6 Gm44428-201ENSMUST00000204474 874 ntBASIC21.2■□□□□ 0.98
ClcnkbQ9WUB6 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC21.2■□□□□ 0.98
ClcnkbQ9WUB6 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ClcnkbQ9WUB6 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ClcnkbQ9WUB6 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ClcnkbQ9WUB6 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
ClcnkbQ9WUB6 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ClcnkbQ9WUB6 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
ClcnkbQ9WUB6 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ClcnkbQ9WUB6 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
ClcnkbQ9WUB6 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC21.18■□□□□ 0.98
ClcnkbQ9WUB6 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ClcnkbQ9WUB6 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ClcnkbQ9WUB6 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ClcnkbQ9WUB6 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ClcnkbQ9WUB6 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ClcnkbQ9WUB6 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
ClcnkbQ9WUB6 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC21.17■□□□□ 0.98
ClcnkbQ9WUB6 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ClcnkbQ9WUB6 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ClcnkbQ9WUB6 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ClcnkbQ9WUB6 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
ClcnkbQ9WUB6 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ClcnkbQ9WUB6 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ClcnkbQ9WUB6 Gm43006-201ENSMUST00000197702 1602 ntBASIC21.17■□□□□ 0.98
ClcnkbQ9WUB6 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ClcnkbQ9WUB6 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ClcnkbQ9WUB6 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ClcnkbQ9WUB6 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ClcnkbQ9WUB6 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC21.16■□□□□ 0.98
ClcnkbQ9WUB6 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ClcnkbQ9WUB6 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ClcnkbQ9WUB6 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
ClcnkbQ9WUB6 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ClcnkbQ9WUB6 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ClcnkbQ9WUB6 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
ClcnkbQ9WUB6 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ClcnkbQ9WUB6 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ClcnkbQ9WUB6 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
ClcnkbQ9WUB6 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
ClcnkbQ9WUB6 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
ClcnkbQ9WUB6 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ClcnkbQ9WUB6 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ClcnkbQ9WUB6 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ClcnkbQ9WUB6 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ClcnkbQ9WUB6 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
ClcnkbQ9WUB6 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ClcnkbQ9WUB6 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
ClcnkbQ9WUB6 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
ClcnkbQ9WUB6 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC21.12■□□□□ 0.97
ClcnkbQ9WUB6 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC21.12■□□□□ 0.97
ClcnkbQ9WUB6 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ClcnkbQ9WUB6 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ClcnkbQ9WUB6 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ClcnkbQ9WUB6 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
ClcnkbQ9WUB6 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
ClcnkbQ9WUB6 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ClcnkbQ9WUB6 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
ClcnkbQ9WUB6 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC21.11■□□□□ 0.97
ClcnkbQ9WUB6 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ClcnkbQ9WUB6 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ClcnkbQ9WUB6 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ClcnkbQ9WUB6 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
ClcnkbQ9WUB6 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ClcnkbQ9WUB6 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ClcnkbQ9WUB6 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC21.09■□□□□ 0.97
ClcnkbQ9WUB6 AC117769.4-201ENSMUST00000225679 685 ntBASIC21.09■□□□□ 0.97
ClcnkbQ9WUB6 Hsf1-207ENSMUST00000228371 2102 ntBASIC21.08■□□□□ 0.97
ClcnkbQ9WUB6 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
ClcnkbQ9WUB6 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
ClcnkbQ9WUB6 AC151971.4-201ENSMUST00000214717 704 ntBASIC21.08■□□□□ 0.97
ClcnkbQ9WUB6 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC21.08■□□□□ 0.96
ClcnkbQ9WUB6 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
ClcnkbQ9WUB6 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
ClcnkbQ9WUB6 Cap2-205ENSMUST00000225824 1634 ntBASIC21.07■□□□□ 0.96
ClcnkbQ9WUB6 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
ClcnkbQ9WUB6 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
ClcnkbQ9WUB6 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
ClcnkbQ9WUB6 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC21.06■□□□□ 0.96
ClcnkbQ9WUB6 Gm12366-201ENSMUST00000121722 873 ntBASIC21.06■□□□□ 0.96
ClcnkbQ9WUB6 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC21.06■□□□□ 0.96
ClcnkbQ9WUB6 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC21.06■□□□□ 0.96
ClcnkbQ9WUB6 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC21.06■□□□□ 0.96
ClcnkbQ9WUB6 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC21.06■□□□□ 0.96
ClcnkbQ9WUB6 Gm5786-201ENSMUST00000085368 882 ntBASIC21.06■□□□□ 0.96
ClcnkbQ9WUB6 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
ClcnkbQ9WUB6 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC21.05■□□□□ 0.96
ClcnkbQ9WUB6 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ClcnkbQ9WUB6 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ClcnkbQ9WUB6 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ClcnkbQ9WUB6 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
ClcnkbQ9WUB6 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
ClcnkbQ9WUB6 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC21.05■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms