Protein–RNA interactions for Protein: Q9R0A1

Clcn2, Chloride channel protein 2, mousemouse

Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn2Q9R0A1 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Clcn2Q9R0A1 Gm7332-201ENSMUST00000118351 454 ntBASIC21.88■■□□□ 1.09
Clcn2Q9R0A1 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Clcn2Q9R0A1 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC21.87■■□□□ 1.09
Clcn2Q9R0A1 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC21.87■■□□□ 1.09
Clcn2Q9R0A1 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC21.87■■□□□ 1.09
Clcn2Q9R0A1 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC21.87■■□□□ 1.09
Clcn2Q9R0A1 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
Clcn2Q9R0A1 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Clcn2Q9R0A1 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Clcn2Q9R0A1 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
Clcn2Q9R0A1 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Clcn2Q9R0A1 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Clcn2Q9R0A1 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
Clcn2Q9R0A1 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
Clcn2Q9R0A1 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Clcn2Q9R0A1 Gm37415-201ENSMUST00000192265 2054 ntBASIC21.85■■□□□ 1.09
Clcn2Q9R0A1 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Clcn2Q9R0A1 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
Clcn2Q9R0A1 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
Clcn2Q9R0A1 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Clcn2Q9R0A1 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Clcn2Q9R0A1 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC21.84■■□□□ 1.09
Clcn2Q9R0A1 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Clcn2Q9R0A1 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
Clcn2Q9R0A1 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Clcn2Q9R0A1 Gm12504-201ENSMUST00000120860 2231 ntBASIC21.84■■□□□ 1.09
Clcn2Q9R0A1 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
Clcn2Q9R0A1 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
Clcn2Q9R0A1 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
Clcn2Q9R0A1 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Clcn2Q9R0A1 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Clcn2Q9R0A1 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Clcn2Q9R0A1 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
Clcn2Q9R0A1 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Clcn2Q9R0A1 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Clcn2Q9R0A1 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC21.83■■□□□ 1.09
Clcn2Q9R0A1 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
Clcn2Q9R0A1 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Clcn2Q9R0A1 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Clcn2Q9R0A1 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Clcn2Q9R0A1 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Clcn2Q9R0A1 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Clcn2Q9R0A1 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Clcn2Q9R0A1 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC21.82■■□□□ 1.08
Clcn2Q9R0A1 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC21.82■■□□□ 1.08
Clcn2Q9R0A1 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
Clcn2Q9R0A1 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Clcn2Q9R0A1 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Clcn2Q9R0A1 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
Clcn2Q9R0A1 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Clcn2Q9R0A1 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Clcn2Q9R0A1 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC21.81■■□□□ 1.08
Clcn2Q9R0A1 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Clcn2Q9R0A1 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Clcn2Q9R0A1 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
Clcn2Q9R0A1 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Clcn2Q9R0A1 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Clcn2Q9R0A1 Notumos-201ENSMUST00000151998 2659 ntBASIC21.8■■□□□ 1.08
Clcn2Q9R0A1 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Clcn2Q9R0A1 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Clcn2Q9R0A1 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Clcn2Q9R0A1 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Clcn2Q9R0A1 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Clcn2Q9R0A1 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Clcn2Q9R0A1 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC21.78■■□□□ 1.08
Clcn2Q9R0A1 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Clcn2Q9R0A1 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
Clcn2Q9R0A1 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Clcn2Q9R0A1 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Clcn2Q9R0A1 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
Clcn2Q9R0A1 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Clcn2Q9R0A1 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC21.77■■□□□ 1.08
Clcn2Q9R0A1 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Clcn2Q9R0A1 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Clcn2Q9R0A1 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Clcn2Q9R0A1 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.07
Clcn2Q9R0A1 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Clcn2Q9R0A1 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Clcn2Q9R0A1 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC21.76■■□□□ 1.07
Clcn2Q9R0A1 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Clcn2Q9R0A1 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Clcn2Q9R0A1 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Clcn2Q9R0A1 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Clcn2Q9R0A1 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC21.75■■□□□ 1.07
Clcn2Q9R0A1 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC21.75■■□□□ 1.07
Clcn2Q9R0A1 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Clcn2Q9R0A1 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Clcn2Q9R0A1 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Clcn2Q9R0A1 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Clcn2Q9R0A1 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Clcn2Q9R0A1 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Clcn2Q9R0A1 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Clcn2Q9R0A1 AC117769.4-201ENSMUST00000225679 685 ntBASIC21.74■■□□□ 1.07
Clcn2Q9R0A1 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Clcn2Q9R0A1 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
Clcn2Q9R0A1 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Clcn2Q9R0A1 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Clcn2Q9R0A1 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Clcn2Q9R0A1 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms