Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 Gm45417-201ENSMUST00000209533 758 ntBASIC18.65■□□□□ 0.58
Nubp1Q9R060 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Nubp1Q9R060 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nubp1Q9R060 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC18.65■□□□□ 0.58
Nubp1Q9R060 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nubp1Q9R060 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Nubp1Q9R060 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC18.64■□□□□ 0.57
Nubp1Q9R060 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nubp1Q9R060 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nubp1Q9R060 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Nubp1Q9R060 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Nubp1Q9R060 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nubp1Q9R060 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nubp1Q9R060 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Nubp1Q9R060 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nubp1Q9R060 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC18.63■□□□□ 0.57
Nubp1Q9R060 Gm18284-201ENSMUST00000172604 624 ntBASIC18.63■□□□□ 0.57
Nubp1Q9R060 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Nubp1Q9R060 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nubp1Q9R060 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Nubp1Q9R060 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nubp1Q9R060 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC18.63■□□□□ 0.57
Nubp1Q9R060 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nubp1Q9R060 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nubp1Q9R060 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nubp1Q9R060 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Nubp1Q9R060 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC18.62■□□□□ 0.57
Nubp1Q9R060 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nubp1Q9R060 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nubp1Q9R060 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nubp1Q9R060 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Nubp1Q9R060 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC18.61■□□□□ 0.57
Nubp1Q9R060 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Nubp1Q9R060 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Nubp1Q9R060 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Nubp1Q9R060 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC18.61■□□□□ 0.57
Nubp1Q9R060 Golgb1-201ENSMUST00000023534 498 ntBASIC18.61■□□□□ 0.57
Nubp1Q9R060 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Nubp1Q9R060 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
Nubp1Q9R060 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Nubp1Q9R060 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC18.59■□□□□ 0.57
Nubp1Q9R060 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nubp1Q9R060 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nubp1Q9R060 AC122428.3-201ENSMUST00000215551 2290 ntBASIC18.59■□□□□ 0.57
Nubp1Q9R060 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nubp1Q9R060 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Nubp1Q9R060 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nubp1Q9R060 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Nubp1Q9R060 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Nubp1Q9R060 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC18.58■□□□□ 0.56
Nubp1Q9R060 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Nubp1Q9R060 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Nubp1Q9R060 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Nubp1Q9R060 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Nubp1Q9R060 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nubp1Q9R060 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nubp1Q9R060 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nubp1Q9R060 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC18.57■□□□□ 0.56
Nubp1Q9R060 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nubp1Q9R060 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC18.57■□□□□ 0.56
Nubp1Q9R060 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nubp1Q9R060 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
Nubp1Q9R060 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Nubp1Q9R060 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nubp1Q9R060 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Nubp1Q9R060 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nubp1Q9R060 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC18.56■□□□□ 0.56
Nubp1Q9R060 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nubp1Q9R060 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nubp1Q9R060 AC164433.2-201ENSMUST00000226346 1701 ntBASIC18.56■□□□□ 0.56
Nubp1Q9R060 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nubp1Q9R060 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nubp1Q9R060 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nubp1Q9R060 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nubp1Q9R060 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nubp1Q9R060 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nubp1Q9R060 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Nubp1Q9R060 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC18.55■□□□□ 0.56
Nubp1Q9R060 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC18.55■□□□□ 0.56
Nubp1Q9R060 Gm11847-201ENSMUST00000125165 1119 ntBASIC18.55■□□□□ 0.56
Nubp1Q9R060 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
Nubp1Q9R060 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Nubp1Q9R060 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nubp1Q9R060 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Nubp1Q9R060 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nubp1Q9R060 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nubp1Q9R060 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
Nubp1Q9R060 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nubp1Q9R060 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nubp1Q9R060 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nubp1Q9R060 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nubp1Q9R060 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Nubp1Q9R060 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nubp1Q9R060 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC18.53■□□□□ 0.56
Nubp1Q9R060 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC18.52■□□□□ 0.56
Nubp1Q9R060 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nubp1Q9R060 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Nubp1Q9R060 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Nubp1Q9R060 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Nubp1Q9R060 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC18.51■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 11.2 ms