Protein–RNA interactions for Protein: Q9D701

Upk3bl1, Uroplakin-3b-like protein 1, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bl1Q9D701 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Upk3bl1Q9D701 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
Upk3bl1Q9D701 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Upk3bl1Q9D701 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.45■□□□□ 0.7
Upk3bl1Q9D701 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Upk3bl1Q9D701 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Upk3bl1Q9D701 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Upk3bl1Q9D701 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC19.45■□□□□ 0.7
Upk3bl1Q9D701 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Upk3bl1Q9D701 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Upk3bl1Q9D701 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Upk3bl1Q9D701 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Upk3bl1Q9D701 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
Upk3bl1Q9D701 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Upk3bl1Q9D701 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Upk3bl1Q9D701 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Upk3bl1Q9D701 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Upk3bl1Q9D701 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Upk3bl1Q9D701 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Upk3bl1Q9D701 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Upk3bl1Q9D701 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Upk3bl1Q9D701 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Upk3bl1Q9D701 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Upk3bl1Q9D701 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Upk3bl1Q9D701 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Upk3bl1Q9D701 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Upk3bl1Q9D701 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.43■□□□□ 0.7
Upk3bl1Q9D701 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Upk3bl1Q9D701 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Upk3bl1Q9D701 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Upk3bl1Q9D701 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Upk3bl1Q9D701 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Upk3bl1Q9D701 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Upk3bl1Q9D701 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Upk3bl1Q9D701 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Upk3bl1Q9D701 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC19.41■□□□□ 0.7
Upk3bl1Q9D701 Gm4430-201ENSMUST00000192413 1943 ntBASIC19.41■□□□□ 0.7
Upk3bl1Q9D701 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Upk3bl1Q9D701 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Upk3bl1Q9D701 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Upk3bl1Q9D701 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Upk3bl1Q9D701 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Upk3bl1Q9D701 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Upk3bl1Q9D701 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
Upk3bl1Q9D701 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Upk3bl1Q9D701 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.39■□□□□ 0.7
Upk3bl1Q9D701 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
Upk3bl1Q9D701 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Upk3bl1Q9D701 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Upk3bl1Q9D701 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Upk3bl1Q9D701 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
Upk3bl1Q9D701 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Upk3bl1Q9D701 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Upk3bl1Q9D701 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Upk3bl1Q9D701 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Upk3bl1Q9D701 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Upk3bl1Q9D701 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Upk3bl1Q9D701 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Upk3bl1Q9D701 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
Upk3bl1Q9D701 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.38■□□□□ 0.69
Upk3bl1Q9D701 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Upk3bl1Q9D701 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.38■□□□□ 0.69
Upk3bl1Q9D701 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Upk3bl1Q9D701 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Upk3bl1Q9D701 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Upk3bl1Q9D701 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Upk3bl1Q9D701 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Upk3bl1Q9D701 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Upk3bl1Q9D701 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Upk3bl1Q9D701 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Upk3bl1Q9D701 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Upk3bl1Q9D701 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Upk3bl1Q9D701 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Upk3bl1Q9D701 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Upk3bl1Q9D701 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Upk3bl1Q9D701 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC19.36■□□□□ 0.69
Upk3bl1Q9D701 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Upk3bl1Q9D701 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Upk3bl1Q9D701 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Upk3bl1Q9D701 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC19.36■□□□□ 0.69
Upk3bl1Q9D701 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Upk3bl1Q9D701 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Upk3bl1Q9D701 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Upk3bl1Q9D701 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC19.35■□□□□ 0.69
Upk3bl1Q9D701 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Upk3bl1Q9D701 Tdp2-203ENSMUST00000223804 1136 ntBASIC19.35■□□□□ 0.69
Upk3bl1Q9D701 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Upk3bl1Q9D701 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC19.35■□□□□ 0.69
Upk3bl1Q9D701 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Upk3bl1Q9D701 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Upk3bl1Q9D701 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC19.35■□□□□ 0.69
Upk3bl1Q9D701 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Upk3bl1Q9D701 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Upk3bl1Q9D701 Kdm3b-204ENSMUST00000224715 2032 ntBASIC19.34■□□□□ 0.69
Upk3bl1Q9D701 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Upk3bl1Q9D701 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Upk3bl1Q9D701 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Upk3bl1Q9D701 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Upk3bl1Q9D701 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Upk3bl1Q9D701 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms