Protein–RNA interactions for Protein: Q9CYQ5

Hcfc1r1, Host cell factor C1 regulator 1, mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcfc1r1Q9CYQ5 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Hcfc1r1Q9CYQ5 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Hcfc1r1Q9CYQ5 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Hcfc1r1Q9CYQ5 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hcfc1r1Q9CYQ5 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hcfc1r1Q9CYQ5 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hcfc1r1Q9CYQ5 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hcfc1r1Q9CYQ5 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Hcfc1r1Q9CYQ5 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Hcfc1r1Q9CYQ5 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Hcfc1r1Q9CYQ5 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hcfc1r1Q9CYQ5 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hcfc1r1Q9CYQ5 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hcfc1r1Q9CYQ5 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Hcfc1r1Q9CYQ5 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC18.55■□□□□ 0.56
Hcfc1r1Q9CYQ5 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC18.54■□□□□ 0.56
Hcfc1r1Q9CYQ5 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hcfc1r1Q9CYQ5 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hcfc1r1Q9CYQ5 Gm12818-201ENSMUST00000117562 1349 ntBASIC18.54■□□□□ 0.56
Hcfc1r1Q9CYQ5 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hcfc1r1Q9CYQ5 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Hcfc1r1Q9CYQ5 Mir3960-201ENSMUST00000198213 73 ntBASIC18.54■□□□□ 0.56
Hcfc1r1Q9CYQ5 Gm45364-201ENSMUST00000210883 159 ntBASIC18.54■□□□□ 0.56
Hcfc1r1Q9CYQ5 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hcfc1r1Q9CYQ5 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hcfc1r1Q9CYQ5 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hcfc1r1Q9CYQ5 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Hcfc1r1Q9CYQ5 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Hcfc1r1Q9CYQ5 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC18.53■□□□□ 0.56
Hcfc1r1Q9CYQ5 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hcfc1r1Q9CYQ5 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hcfc1r1Q9CYQ5 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hcfc1r1Q9CYQ5 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Hcfc1r1Q9CYQ5 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Hcfc1r1Q9CYQ5 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Hcfc1r1Q9CYQ5 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
Hcfc1r1Q9CYQ5 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Hcfc1r1Q9CYQ5 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC18.52■□□□□ 0.56
Hcfc1r1Q9CYQ5 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Hcfc1r1Q9CYQ5 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Hcfc1r1Q9CYQ5 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Hcfc1r1Q9CYQ5 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC18.52■□□□□ 0.55
Hcfc1r1Q9CYQ5 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC18.52■□□□□ 0.55
Hcfc1r1Q9CYQ5 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Hcfc1r1Q9CYQ5 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Hcfc1r1Q9CYQ5 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Hcfc1r1Q9CYQ5 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Hcfc1r1Q9CYQ5 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC18.51■□□□□ 0.55
Hcfc1r1Q9CYQ5 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Hcfc1r1Q9CYQ5 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Hcfc1r1Q9CYQ5 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Hcfc1r1Q9CYQ5 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Hcfc1r1Q9CYQ5 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Hcfc1r1Q9CYQ5 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Hcfc1r1Q9CYQ5 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
Hcfc1r1Q9CYQ5 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Hcfc1r1Q9CYQ5 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Hcfc1r1Q9CYQ5 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Hcfc1r1Q9CYQ5 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Hcfc1r1Q9CYQ5 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Hcfc1r1Q9CYQ5 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Hcfc1r1Q9CYQ5 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
Hcfc1r1Q9CYQ5 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Hcfc1r1Q9CYQ5 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Hcfc1r1Q9CYQ5 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Hcfc1r1Q9CYQ5 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC18.48■□□□□ 0.55
Hcfc1r1Q9CYQ5 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Hcfc1r1Q9CYQ5 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Hcfc1r1Q9CYQ5 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Hcfc1r1Q9CYQ5 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Hcfc1r1Q9CYQ5 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Hcfc1r1Q9CYQ5 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Hcfc1r1Q9CYQ5 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hcfc1r1Q9CYQ5 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Hcfc1r1Q9CYQ5 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
Hcfc1r1Q9CYQ5 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hcfc1r1Q9CYQ5 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hcfc1r1Q9CYQ5 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hcfc1r1Q9CYQ5 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hcfc1r1Q9CYQ5 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hcfc1r1Q9CYQ5 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Hcfc1r1Q9CYQ5 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hcfc1r1Q9CYQ5 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Hcfc1r1Q9CYQ5 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.54
Hcfc1r1Q9CYQ5 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Hcfc1r1Q9CYQ5 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hcfc1r1Q9CYQ5 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hcfc1r1Q9CYQ5 Kdm3b-204ENSMUST00000224715 2032 ntBASIC18.45■□□□□ 0.54
Hcfc1r1Q9CYQ5 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Hcfc1r1Q9CYQ5 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hcfc1r1Q9CYQ5 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hcfc1r1Q9CYQ5 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hcfc1r1Q9CYQ5 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hcfc1r1Q9CYQ5 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hcfc1r1Q9CYQ5 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hcfc1r1Q9CYQ5 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Hcfc1r1Q9CYQ5 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC18.44■□□□□ 0.54
Hcfc1r1Q9CYQ5 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hcfc1r1Q9CYQ5 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Hcfc1r1Q9CYQ5 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms