Protein–RNA interactions for Protein: Q9CWM4

Pfdn1, Prefoldin subunit 1, mousemouse

Predictions only

Length 122 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn1Q9CWM4 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Pfdn1Q9CWM4 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pfdn1Q9CWM4 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pfdn1Q9CWM4 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Pfdn1Q9CWM4 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Pfdn1Q9CWM4 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Pfdn1Q9CWM4 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Pfdn1Q9CWM4 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pfdn1Q9CWM4 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Pfdn1Q9CWM4 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pfdn1Q9CWM4 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pfdn1Q9CWM4 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Pfdn1Q9CWM4 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
Pfdn1Q9CWM4 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.85■□□□□ 0.61
Pfdn1Q9CWM4 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Pfdn1Q9CWM4 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pfdn1Q9CWM4 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pfdn1Q9CWM4 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pfdn1Q9CWM4 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pfdn1Q9CWM4 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.84■□□□□ 0.61
Pfdn1Q9CWM4 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pfdn1Q9CWM4 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Pfdn1Q9CWM4 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Pfdn1Q9CWM4 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Pfdn1Q9CWM4 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC18.83■□□□□ 0.6
Pfdn1Q9CWM4 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Pfdn1Q9CWM4 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Pfdn1Q9CWM4 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pfdn1Q9CWM4 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pfdn1Q9CWM4 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pfdn1Q9CWM4 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pfdn1Q9CWM4 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pfdn1Q9CWM4 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Pfdn1Q9CWM4 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pfdn1Q9CWM4 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pfdn1Q9CWM4 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pfdn1Q9CWM4 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pfdn1Q9CWM4 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Pfdn1Q9CWM4 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pfdn1Q9CWM4 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pfdn1Q9CWM4 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Pfdn1Q9CWM4 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pfdn1Q9CWM4 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pfdn1Q9CWM4 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Pfdn1Q9CWM4 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Pfdn1Q9CWM4 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Pfdn1Q9CWM4 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Pfdn1Q9CWM4 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pfdn1Q9CWM4 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.8■□□□□ 0.6
Pfdn1Q9CWM4 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pfdn1Q9CWM4 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pfdn1Q9CWM4 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Pfdn1Q9CWM4 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pfdn1Q9CWM4 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pfdn1Q9CWM4 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pfdn1Q9CWM4 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pfdn1Q9CWM4 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pfdn1Q9CWM4 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC18.78■□□□□ 0.6
Pfdn1Q9CWM4 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pfdn1Q9CWM4 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pfdn1Q9CWM4 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Pfdn1Q9CWM4 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pfdn1Q9CWM4 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Pfdn1Q9CWM4 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pfdn1Q9CWM4 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pfdn1Q9CWM4 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
Pfdn1Q9CWM4 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pfdn1Q9CWM4 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pfdn1Q9CWM4 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pfdn1Q9CWM4 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Pfdn1Q9CWM4 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pfdn1Q9CWM4 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Pfdn1Q9CWM4 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pfdn1Q9CWM4 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pfdn1Q9CWM4 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Pfdn1Q9CWM4 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pfdn1Q9CWM4 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.76■□□□□ 0.59
Pfdn1Q9CWM4 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pfdn1Q9CWM4 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Pfdn1Q9CWM4 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Pfdn1Q9CWM4 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pfdn1Q9CWM4 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Pfdn1Q9CWM4 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pfdn1Q9CWM4 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pfdn1Q9CWM4 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pfdn1Q9CWM4 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Pfdn1Q9CWM4 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
Pfdn1Q9CWM4 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.75■□□□□ 0.59
Pfdn1Q9CWM4 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Pfdn1Q9CWM4 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Pfdn1Q9CWM4 Gm26115-201ENSMUST00000175605 87 ntBASIC18.75■□□□□ 0.59
Pfdn1Q9CWM4 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Pfdn1Q9CWM4 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pfdn1Q9CWM4 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Pfdn1Q9CWM4 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pfdn1Q9CWM4 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pfdn1Q9CWM4 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Pfdn1Q9CWM4 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC18.74■□□□□ 0.59
Pfdn1Q9CWM4 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pfdn1Q9CWM4 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms