Protein–RNA interactions for Protein: Q9CUN6

Smurf1, E3 ubiquitin-protein ligase SMURF1, mousemouse

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smurf1Q9CUN6 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Smurf1Q9CUN6 Gm22567-201ENSMUST00000175542 342 ntBASIC19.41■□□□□ 0.7
Smurf1Q9CUN6 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smurf1Q9CUN6 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smurf1Q9CUN6 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Smurf1Q9CUN6 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Smurf1Q9CUN6 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Smurf1Q9CUN6 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smurf1Q9CUN6 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smurf1Q9CUN6 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Smurf1Q9CUN6 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Smurf1Q9CUN6 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC19.39■□□□□ 0.69
Smurf1Q9CUN6 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Smurf1Q9CUN6 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Smurf1Q9CUN6 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Smurf1Q9CUN6 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Smurf1Q9CUN6 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Smurf1Q9CUN6 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Smurf1Q9CUN6 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Smurf1Q9CUN6 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC19.38■□□□□ 0.69
Smurf1Q9CUN6 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smurf1Q9CUN6 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smurf1Q9CUN6 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC19.37■□□□□ 0.69
Smurf1Q9CUN6 Gm5987-201ENSMUST00000196433 1151 ntBASIC19.37■□□□□ 0.69
Smurf1Q9CUN6 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smurf1Q9CUN6 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smurf1Q9CUN6 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smurf1Q9CUN6 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smurf1Q9CUN6 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC19.36■□□□□ 0.69
Smurf1Q9CUN6 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Smurf1Q9CUN6 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Smurf1Q9CUN6 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Smurf1Q9CUN6 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smurf1Q9CUN6 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smurf1Q9CUN6 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smurf1Q9CUN6 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smurf1Q9CUN6 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smurf1Q9CUN6 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smurf1Q9CUN6 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smurf1Q9CUN6 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Smurf1Q9CUN6 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Smurf1Q9CUN6 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smurf1Q9CUN6 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC19.34■□□□□ 0.69
Smurf1Q9CUN6 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC19.34■□□□□ 0.69
Smurf1Q9CUN6 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smurf1Q9CUN6 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smurf1Q9CUN6 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Smurf1Q9CUN6 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smurf1Q9CUN6 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Smurf1Q9CUN6 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC19.33■□□□□ 0.69
Smurf1Q9CUN6 Gm11599-201ENSMUST00000118720 878 ntBASIC19.33■□□□□ 0.68
Smurf1Q9CUN6 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Smurf1Q9CUN6 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smurf1Q9CUN6 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smurf1Q9CUN6 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smurf1Q9CUN6 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
Smurf1Q9CUN6 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smurf1Q9CUN6 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smurf1Q9CUN6 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
Smurf1Q9CUN6 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smurf1Q9CUN6 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smurf1Q9CUN6 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smurf1Q9CUN6 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smurf1Q9CUN6 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Smurf1Q9CUN6 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Smurf1Q9CUN6 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smurf1Q9CUN6 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smurf1Q9CUN6 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smurf1Q9CUN6 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smurf1Q9CUN6 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smurf1Q9CUN6 AC131739.1-201ENSMUST00000221692 1245 ntBASIC19.3■□□□□ 0.68
Smurf1Q9CUN6 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smurf1Q9CUN6 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smurf1Q9CUN6 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smurf1Q9CUN6 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Smurf1Q9CUN6 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Smurf1Q9CUN6 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Smurf1Q9CUN6 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smurf1Q9CUN6 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC19.29■□□□□ 0.68
Smurf1Q9CUN6 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smurf1Q9CUN6 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Smurf1Q9CUN6 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smurf1Q9CUN6 Gm42418-201ENSMUST00000182010 1831 ntBASIC19.28■□□□□ 0.68
Smurf1Q9CUN6 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC19.28■□□□□ 0.68
Smurf1Q9CUN6 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Smurf1Q9CUN6 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smurf1Q9CUN6 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC19.28■□□□□ 0.68
Smurf1Q9CUN6 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.28■□□□□ 0.68
Smurf1Q9CUN6 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Smurf1Q9CUN6 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Smurf1Q9CUN6 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Smurf1Q9CUN6 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Smurf1Q9CUN6 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Smurf1Q9CUN6 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Smurf1Q9CUN6 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Smurf1Q9CUN6 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Smurf1Q9CUN6 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC19.27■□□□□ 0.67
Smurf1Q9CUN6 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
Smurf1Q9CUN6 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.67
Smurf1Q9CUN6 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms