Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim16Q99PP9 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Trim16Q99PP9 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim16Q99PP9 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Trim16Q99PP9 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim16Q99PP9 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Trim16Q99PP9 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim16Q99PP9 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim16Q99PP9 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim16Q99PP9 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC20.79■□□□□ 0.92
Trim16Q99PP9 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC20.79■□□□□ 0.92
Trim16Q99PP9 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim16Q99PP9 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim16Q99PP9 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim16Q99PP9 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim16Q99PP9 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim16Q99PP9 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim16Q99PP9 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Trim16Q99PP9 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Trim16Q99PP9 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.78■□□□□ 0.92
Trim16Q99PP9 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Trim16Q99PP9 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Trim16Q99PP9 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Trim16Q99PP9 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trim16Q99PP9 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.91
Trim16Q99PP9 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Trim16Q99PP9 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim16Q99PP9 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim16Q99PP9 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Trim16Q99PP9 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim16Q99PP9 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim16Q99PP9 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim16Q99PP9 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim16Q99PP9 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim16Q99PP9 AC153524.1-201ENSMUST00000220436 1935 ntBASIC20.76■□□□□ 0.91
Trim16Q99PP9 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim16Q99PP9 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim16Q99PP9 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Trim16Q99PP9 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC20.75■□□□□ 0.91
Trim16Q99PP9 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC20.75■□□□□ 0.91
Trim16Q99PP9 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim16Q99PP9 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC20.74■□□□□ 0.91
Trim16Q99PP9 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Trim16Q99PP9 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trim16Q99PP9 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trim16Q99PP9 Gm13042-201ENSMUST00000119244 1955 ntBASIC20.74■□□□□ 0.91
Trim16Q99PP9 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.74■□□□□ 0.91
Trim16Q99PP9 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim16Q99PP9 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim16Q99PP9 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.73■□□□□ 0.91
Trim16Q99PP9 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim16Q99PP9 Gm10420-201ENSMUST00000121713 882 ntBASIC20.73■□□□□ 0.91
Trim16Q99PP9 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Trim16Q99PP9 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim16Q99PP9 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim16Q99PP9 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim16Q99PP9 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim16Q99PP9 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim16Q99PP9 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC20.72■□□□□ 0.91
Trim16Q99PP9 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Trim16Q99PP9 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim16Q99PP9 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Trim16Q99PP9 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim16Q99PP9 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim16Q99PP9 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim16Q99PP9 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim16Q99PP9 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Trim16Q99PP9 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Trim16Q99PP9 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim16Q99PP9 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.71■□□□□ 0.91
Trim16Q99PP9 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.7■□□□□ 0.9
Trim16Q99PP9 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim16Q99PP9 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Trim16Q99PP9 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim16Q99PP9 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim16Q99PP9 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20.7■□□□□ 0.9
Trim16Q99PP9 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim16Q99PP9 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim16Q99PP9 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim16Q99PP9 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim16Q99PP9 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Trim16Q99PP9 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim16Q99PP9 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim16Q99PP9 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim16Q99PP9 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim16Q99PP9 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim16Q99PP9 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim16Q99PP9 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim16Q99PP9 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim16Q99PP9 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
Trim16Q99PP9 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim16Q99PP9 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim16Q99PP9 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim16Q99PP9 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Trim16Q99PP9 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Trim16Q99PP9 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim16Q99PP9 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
Trim16Q99PP9 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC20.66■□□□□ 0.9
Trim16Q99PP9 Gm5067-201ENSMUST00000170449 1009 ntBASIC20.66■□□□□ 0.9
Trim16Q99PP9 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC20.66■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 103.5 ms