Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Nkx6-1Q99MA9 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nkx6-1Q99MA9 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nkx6-1Q99MA9 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
Nkx6-1Q99MA9 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nkx6-1Q99MA9 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nkx6-1Q99MA9 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nkx6-1Q99MA9 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Nkx6-1Q99MA9 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC20.24■□□□□ 0.83
Nkx6-1Q99MA9 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nkx6-1Q99MA9 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nkx6-1Q99MA9 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nkx6-1Q99MA9 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nkx6-1Q99MA9 Nsd1-206ENSMUST00000224918 1001 ntBASIC20.23■□□□□ 0.83
Nkx6-1Q99MA9 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC20.23■□□□□ 0.83
Nkx6-1Q99MA9 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nkx6-1Q99MA9 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nkx6-1Q99MA9 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Nkx6-1Q99MA9 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC20.22■□□□□ 0.83
Nkx6-1Q99MA9 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nkx6-1Q99MA9 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nkx6-1Q99MA9 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nkx6-1Q99MA9 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nkx6-1Q99MA9 Gm8495-201ENSMUST00000188740 694 ntBASIC20.21■□□□□ 0.83
Nkx6-1Q99MA9 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Nkx6-1Q99MA9 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC20.21■□□□□ 0.83
Nkx6-1Q99MA9 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nkx6-1Q99MA9 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Nkx6-1Q99MA9 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC20.21■□□□□ 0.83
Nkx6-1Q99MA9 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Nkx6-1Q99MA9 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nkx6-1Q99MA9 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC20.2■□□□□ 0.82
Nkx6-1Q99MA9 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nkx6-1Q99MA9 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Nkx6-1Q99MA9 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nkx6-1Q99MA9 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Nkx6-1Q99MA9 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Nkx6-1Q99MA9 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Nkx6-1Q99MA9 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nkx6-1Q99MA9 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nkx6-1Q99MA9 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC20.19■□□□□ 0.82
Nkx6-1Q99MA9 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.19■□□□□ 0.82
Nkx6-1Q99MA9 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Nkx6-1Q99MA9 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nkx6-1Q99MA9 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nkx6-1Q99MA9 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nkx6-1Q99MA9 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nkx6-1Q99MA9 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Nkx6-1Q99MA9 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nkx6-1Q99MA9 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nkx6-1Q99MA9 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nkx6-1Q99MA9 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nkx6-1Q99MA9 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Nkx6-1Q99MA9 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Nkx6-1Q99MA9 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Nkx6-1Q99MA9 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nkx6-1Q99MA9 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Nkx6-1Q99MA9 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nkx6-1Q99MA9 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Nkx6-1Q99MA9 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nkx6-1Q99MA9 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Nkx6-1Q99MA9 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nkx6-1Q99MA9 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
Nkx6-1Q99MA9 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nkx6-1Q99MA9 Gm18284-201ENSMUST00000172604 624 ntBASIC20.16■□□□□ 0.82
Nkx6-1Q99MA9 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC20.16■□□□□ 0.82
Nkx6-1Q99MA9 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nkx6-1Q99MA9 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nkx6-1Q99MA9 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Nkx6-1Q99MA9 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nkx6-1Q99MA9 AC117245.4-201ENSMUST00000217388 1646 ntBASIC20.15■□□□□ 0.82
Nkx6-1Q99MA9 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nkx6-1Q99MA9 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Nkx6-1Q99MA9 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Nkx6-1Q99MA9 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
Nkx6-1Q99MA9 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nkx6-1Q99MA9 Gm10620-201ENSMUST00000098379 1332 ntBASIC20.12■□□□□ 0.81
Nkx6-1Q99MA9 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC20.12■□□□□ 0.81
Nkx6-1Q99MA9 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC20.12■□□□□ 0.81
Nkx6-1Q99MA9 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nkx6-1Q99MA9 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nkx6-1Q99MA9 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nkx6-1Q99MA9 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nkx6-1Q99MA9 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Nkx6-1Q99MA9 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Nkx6-1Q99MA9 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC20.11■□□□□ 0.81
Nkx6-1Q99MA9 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Nkx6-1Q99MA9 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Nkx6-1Q99MA9 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Nkx6-1Q99MA9 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Nkx6-1Q99MA9 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC20.11■□□□□ 0.81
Nkx6-1Q99MA9 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Nkx6-1Q99MA9 Gm9207-201ENSMUST00000198773 1115 ntBASIC20.11■□□□□ 0.81
Nkx6-1Q99MA9 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Nkx6-1Q99MA9 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nkx6-1Q99MA9 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC20.1■□□□□ 0.81
Nkx6-1Q99MA9 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC20.1■□□□□ 0.81
Nkx6-1Q99MA9 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Nkx6-1Q99MA9 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC20.1■□□□□ 0.81
Nkx6-1Q99MA9 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 96.5 ms