Protein–RNA interactions for Protein: Q99M54

Cdca3, Cell division cycle-associated protein 3, mousemouse

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdca3Q99M54 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cdca3Q99M54 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
Cdca3Q99M54 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cdca3Q99M54 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cdca3Q99M54 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cdca3Q99M54 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cdca3Q99M54 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cdca3Q99M54 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cdca3Q99M54 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cdca3Q99M54 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cdca3Q99M54 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Cdca3Q99M54 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cdca3Q99M54 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Cdca3Q99M54 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cdca3Q99M54 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cdca3Q99M54 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cdca3Q99M54 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.76
Cdca3Q99M54 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC19.77■□□□□ 0.76
Cdca3Q99M54 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Cdca3Q99M54 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.77■□□□□ 0.76
Cdca3Q99M54 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Cdca3Q99M54 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Cdca3Q99M54 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC19.77■□□□□ 0.76
Cdca3Q99M54 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Cdca3Q99M54 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Cdca3Q99M54 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cdca3Q99M54 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cdca3Q99M54 Gm7199-201ENSMUST00000118327 1485 ntBASIC19.76■□□□□ 0.75
Cdca3Q99M54 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Cdca3Q99M54 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC19.76■□□□□ 0.75
Cdca3Q99M54 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cdca3Q99M54 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC19.76■□□□□ 0.75
Cdca3Q99M54 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cdca3Q99M54 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC19.76■□□□□ 0.75
Cdca3Q99M54 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC19.75■□□□□ 0.75
Cdca3Q99M54 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cdca3Q99M54 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cdca3Q99M54 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cdca3Q99M54 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cdca3Q99M54 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Cdca3Q99M54 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC19.75■□□□□ 0.75
Cdca3Q99M54 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cdca3Q99M54 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cdca3Q99M54 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cdca3Q99M54 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cdca3Q99M54 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Cdca3Q99M54 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Cdca3Q99M54 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cdca3Q99M54 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cdca3Q99M54 Gm9959-201ENSMUST00000068277 390 ntBASIC19.74■□□□□ 0.75
Cdca3Q99M54 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cdca3Q99M54 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Cdca3Q99M54 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cdca3Q99M54 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cdca3Q99M54 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Cdca3Q99M54 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Cdca3Q99M54 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Cdca3Q99M54 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cdca3Q99M54 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC19.73■□□□□ 0.75
Cdca3Q99M54 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cdca3Q99M54 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Cdca3Q99M54 Gm18755-201ENSMUST00000218030 1099 ntBASIC19.72■□□□□ 0.75
Cdca3Q99M54 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cdca3Q99M54 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Cdca3Q99M54 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Cdca3Q99M54 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC19.71■□□□□ 0.75
Cdca3Q99M54 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Cdca3Q99M54 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cdca3Q99M54 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cdca3Q99M54 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cdca3Q99M54 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cdca3Q99M54 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cdca3Q99M54 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cdca3Q99M54 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cdca3Q99M54 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cdca3Q99M54 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC19.7■□□□□ 0.74
Cdca3Q99M54 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
Cdca3Q99M54 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cdca3Q99M54 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cdca3Q99M54 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.69■□□□□ 0.74
Cdca3Q99M54 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cdca3Q99M54 Gm26766-202ENSMUST00000227544 2347 ntBASIC19.69■□□□□ 0.74
Cdca3Q99M54 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Cdca3Q99M54 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cdca3Q99M54 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC19.69■□□□□ 0.74
Cdca3Q99M54 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cdca3Q99M54 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Cdca3Q99M54 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cdca3Q99M54 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cdca3Q99M54 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cdca3Q99M54 AC117769.4-201ENSMUST00000225679 685 ntBASIC19.68■□□□□ 0.74
Cdca3Q99M54 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Cdca3Q99M54 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC19.67■□□□□ 0.74
Cdca3Q99M54 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC19.67■□□□□ 0.74
Cdca3Q99M54 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cdca3Q99M54 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cdca3Q99M54 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Cdca3Q99M54 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Cdca3Q99M54 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Cdca3Q99M54 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms