Protein–RNA interactions for Protein: Q99KL7

Rab28, Ras-related protein Rab-28, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab28Q99KL7 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rab28Q99KL7 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rab28Q99KL7 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Rab28Q99KL7 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rab28Q99KL7 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Rab28Q99KL7 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC20.81■□□□□ 0.92
Rab28Q99KL7 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rab28Q99KL7 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rab28Q99KL7 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Rab28Q99KL7 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Rab28Q99KL7 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.8■□□□□ 0.92
Rab28Q99KL7 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Rab28Q99KL7 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Rab28Q99KL7 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rab28Q99KL7 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rab28Q99KL7 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rab28Q99KL7 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rab28Q99KL7 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rab28Q99KL7 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Rab28Q99KL7 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC20.79■□□□□ 0.92
Rab28Q99KL7 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.78■□□□□ 0.92
Rab28Q99KL7 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rab28Q99KL7 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rab28Q99KL7 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rab28Q99KL7 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Rab28Q99KL7 Gm5812-201ENSMUST00000061073 957 ntBASIC20.78■□□□□ 0.92
Rab28Q99KL7 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rab28Q99KL7 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rab28Q99KL7 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rab28Q99KL7 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Rab28Q99KL7 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rab28Q99KL7 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rab28Q99KL7 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rab28Q99KL7 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rab28Q99KL7 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Rab28Q99KL7 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Rab28Q99KL7 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Rab28Q99KL7 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.77■□□□□ 0.91
Rab28Q99KL7 Gm28536-201ENSMUST00000190971 1317 ntBASIC20.77■□□□□ 0.91
Rab28Q99KL7 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.76■□□□□ 0.91
Rab28Q99KL7 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rab28Q99KL7 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC20.76■□□□□ 0.91
Rab28Q99KL7 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rab28Q99KL7 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rab28Q99KL7 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.76■□□□□ 0.91
Rab28Q99KL7 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Rab28Q99KL7 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rab28Q99KL7 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rab28Q99KL7 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Rab28Q99KL7 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rab28Q99KL7 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rab28Q99KL7 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rab28Q99KL7 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC20.75■□□□□ 0.91
Rab28Q99KL7 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
Rab28Q99KL7 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rab28Q99KL7 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Rab28Q99KL7 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rab28Q99KL7 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.74■□□□□ 0.91
Rab28Q99KL7 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Rab28Q99KL7 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Rab28Q99KL7 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rab28Q99KL7 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC20.74■□□□□ 0.91
Rab28Q99KL7 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Rab28Q99KL7 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rab28Q99KL7 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Rab28Q99KL7 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rab28Q99KL7 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rab28Q99KL7 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rab28Q99KL7 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rab28Q99KL7 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rab28Q99KL7 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Rab28Q99KL7 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rab28Q99KL7 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rab28Q99KL7 Gm16464-201ENSMUST00000117815 1095 ntBASIC20.72■□□□□ 0.91
Rab28Q99KL7 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC20.72■□□□□ 0.91
Rab28Q99KL7 Gm11847-201ENSMUST00000125165 1119 ntBASIC20.72■□□□□ 0.91
Rab28Q99KL7 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rab28Q99KL7 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rab28Q99KL7 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC20.72■□□□□ 0.91
Rab28Q99KL7 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rab28Q99KL7 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Rab28Q99KL7 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC20.71■□□□□ 0.91
Rab28Q99KL7 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Rab28Q99KL7 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC20.71■□□□□ 0.91
Rab28Q99KL7 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
Rab28Q99KL7 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Rab28Q99KL7 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rab28Q99KL7 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rab28Q99KL7 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rab28Q99KL7 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rab28Q99KL7 Gm5522-201ENSMUST00000189483 1242 ntBASIC20.69■□□□□ 0.9
Rab28Q99KL7 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC20.69■□□□□ 0.9
Rab28Q99KL7 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Rab28Q99KL7 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rab28Q99KL7 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
Rab28Q99KL7 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rab28Q99KL7 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rab28Q99KL7 Gm10232-201ENSMUST00000089221 720 ntBASIC20.68■□□□□ 0.9
Rab28Q99KL7 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rab28Q99KL7 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms