Protein–RNA interactions for Protein: Q91XZ5

Pcdhb5, Protocadherin beta 5, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb5Q91XZ5 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Pcdhb5Q91XZ5 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Pcdhb5Q91XZ5 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC25.55■■□□□ 1.68
Pcdhb5Q91XZ5 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
Pcdhb5Q91XZ5 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Pcdhb5Q91XZ5 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC25.55■■□□□ 1.68
Pcdhb5Q91XZ5 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Pcdhb5Q91XZ5 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Pcdhb5Q91XZ5 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Pcdhb5Q91XZ5 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Pcdhb5Q91XZ5 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Pcdhb5Q91XZ5 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Pcdhb5Q91XZ5 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
Pcdhb5Q91XZ5 Gm9847-201ENSMUST00000052528 599 ntBASIC25.54■■□□□ 1.68
Pcdhb5Q91XZ5 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Pcdhb5Q91XZ5 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
Pcdhb5Q91XZ5 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Pcdhb5Q91XZ5 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC25.53■■□□□ 1.68
Pcdhb5Q91XZ5 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Pcdhb5Q91XZ5 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC25.53■■□□□ 1.68
Pcdhb5Q91XZ5 Gm43034-201ENSMUST00000198678 1364 ntBASIC25.52■■□□□ 1.68
Pcdhb5Q91XZ5 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Pcdhb5Q91XZ5 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Pcdhb5Q91XZ5 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
Pcdhb5Q91XZ5 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Pcdhb5Q91XZ5 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
Pcdhb5Q91XZ5 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC25.51■■□□□ 1.67
Pcdhb5Q91XZ5 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Pcdhb5Q91XZ5 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Pcdhb5Q91XZ5 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC25.5■■□□□ 1.67
Pcdhb5Q91XZ5 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC25.5■■□□□ 1.67
Pcdhb5Q91XZ5 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Pcdhb5Q91XZ5 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Pcdhb5Q91XZ5 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Pcdhb5Q91XZ5 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC25.49■■□□□ 1.67
Pcdhb5Q91XZ5 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Pcdhb5Q91XZ5 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
Pcdhb5Q91XZ5 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
Pcdhb5Q91XZ5 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC25.49■■□□□ 1.67
Pcdhb5Q91XZ5 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Pcdhb5Q91XZ5 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
Pcdhb5Q91XZ5 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Pcdhb5Q91XZ5 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Pcdhb5Q91XZ5 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC25.48■■□□□ 1.67
Pcdhb5Q91XZ5 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Pcdhb5Q91XZ5 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC25.47■■□□□ 1.67
Pcdhb5Q91XZ5 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Pcdhb5Q91XZ5 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC25.47■■□□□ 1.67
Pcdhb5Q91XZ5 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC25.47■■□□□ 1.67
Pcdhb5Q91XZ5 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC25.46■■□□□ 1.67
Pcdhb5Q91XZ5 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Pcdhb5Q91XZ5 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Pcdhb5Q91XZ5 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
Pcdhb5Q91XZ5 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Pcdhb5Q91XZ5 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
Pcdhb5Q91XZ5 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
Pcdhb5Q91XZ5 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
Pcdhb5Q91XZ5 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC25.44■■□□□ 1.66
Pcdhb5Q91XZ5 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC25.43■■□□□ 1.66
Pcdhb5Q91XZ5 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Pcdhb5Q91XZ5 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
Pcdhb5Q91XZ5 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC25.43■■□□□ 1.66
Pcdhb5Q91XZ5 Gm21956-201ENSMUST00000179946 522 ntBASIC25.42■■□□□ 1.66
Pcdhb5Q91XZ5 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC25.41■■□□□ 1.66
Pcdhb5Q91XZ5 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC25.41■■□□□ 1.66
Pcdhb5Q91XZ5 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC25.41■■□□□ 1.66
Pcdhb5Q91XZ5 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC25.41■■□□□ 1.66
Pcdhb5Q91XZ5 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Pcdhb5Q91XZ5 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Pcdhb5Q91XZ5 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
Pcdhb5Q91XZ5 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC25.4■■□□□ 1.66
Pcdhb5Q91XZ5 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC25.4■■□□□ 1.66
Pcdhb5Q91XZ5 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Pcdhb5Q91XZ5 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Pcdhb5Q91XZ5 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC25.4■■□□□ 1.66
Pcdhb5Q91XZ5 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Pcdhb5Q91XZ5 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Pcdhb5Q91XZ5 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Pcdhb5Q91XZ5 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.66
Pcdhb5Q91XZ5 Gm12922-201ENSMUST00000120626 809 ntBASIC25.39■■□□□ 1.66
Pcdhb5Q91XZ5 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Pcdhb5Q91XZ5 Gm10620-201ENSMUST00000098379 1332 ntBASIC25.38■■□□□ 1.65
Pcdhb5Q91XZ5 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC25.38■■□□□ 1.65
Pcdhb5Q91XZ5 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
Pcdhb5Q91XZ5 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Pcdhb5Q91XZ5 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC25.38■■□□□ 1.65
Pcdhb5Q91XZ5 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Pcdhb5Q91XZ5 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC25.37■■□□□ 1.65
Pcdhb5Q91XZ5 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
Pcdhb5Q91XZ5 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Pcdhb5Q91XZ5 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC25.36■■□□□ 1.65
Pcdhb5Q91XZ5 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC25.36■■□□□ 1.65
Pcdhb5Q91XZ5 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC25.36■■□□□ 1.65
Pcdhb5Q91XZ5 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
Pcdhb5Q91XZ5 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC25.35■■□□□ 1.65
Pcdhb5Q91XZ5 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
Pcdhb5Q91XZ5 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
Pcdhb5Q91XZ5 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Pcdhb5Q91XZ5 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC25.35■■□□□ 1.65
Pcdhb5Q91XZ5 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC25.34■■□□□ 1.65
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms