Protein–RNA interactions for Protein: Q91XY2

Pcdhga6, Protocadherin gamma A6, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga6Q91XY2 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdhga6Q91XY2 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdhga6Q91XY2 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdhga6Q91XY2 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Pcdhga6Q91XY2 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdhga6Q91XY2 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdhga6Q91XY2 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC21.2■□□□□ 0.98
Pcdhga6Q91XY2 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdhga6Q91XY2 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdhga6Q91XY2 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdhga6Q91XY2 Il17rd-202ENSMUST00000223942 2186 ntBASIC21.2■□□□□ 0.98
Pcdhga6Q91XY2 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdhga6Q91XY2 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Pcdhga6Q91XY2 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Pcdhga6Q91XY2 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC21.19■□□□□ 0.98
Pcdhga6Q91XY2 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdhga6Q91XY2 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdhga6Q91XY2 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdhga6Q91XY2 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdhga6Q91XY2 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdhga6Q91XY2 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdhga6Q91XY2 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdhga6Q91XY2 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdhga6Q91XY2 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdhga6Q91XY2 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdhga6Q91XY2 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC21.17■□□□□ 0.98
Pcdhga6Q91XY2 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdhga6Q91XY2 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdhga6Q91XY2 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhga6Q91XY2 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhga6Q91XY2 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhga6Q91XY2 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhga6Q91XY2 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhga6Q91XY2 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC21.16■□□□□ 0.98
Pcdhga6Q91XY2 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
Pcdhga6Q91XY2 Gm27454-201ENSMUST00000185090 204 ntBASIC21.16■□□□□ 0.98
Pcdhga6Q91XY2 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhga6Q91XY2 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhga6Q91XY2 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdhga6Q91XY2 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC21.15■□□□□ 0.98
Pcdhga6Q91XY2 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Pcdhga6Q91XY2 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC21.14■□□□□ 0.97
Pcdhga6Q91XY2 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdhga6Q91XY2 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdhga6Q91XY2 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC21.13■□□□□ 0.97
Pcdhga6Q91XY2 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdhga6Q91XY2 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdhga6Q91XY2 Gm7199-201ENSMUST00000118327 1485 ntBASIC21.13■□□□□ 0.97
Pcdhga6Q91XY2 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdhga6Q91XY2 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdhga6Q91XY2 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC21.12■□□□□ 0.97
Pcdhga6Q91XY2 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdhga6Q91XY2 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Pcdhga6Q91XY2 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdhga6Q91XY2 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdhga6Q91XY2 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC21.12■□□□□ 0.97
Pcdhga6Q91XY2 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdhga6Q91XY2 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdhga6Q91XY2 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdhga6Q91XY2 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC21.11■□□□□ 0.97
Pcdhga6Q91XY2 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC21.11■□□□□ 0.97
Pcdhga6Q91XY2 Gm45417-201ENSMUST00000209533 758 ntBASIC21.11■□□□□ 0.97
Pcdhga6Q91XY2 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdhga6Q91XY2 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdhga6Q91XY2 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdhga6Q91XY2 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC21.1■□□□□ 0.97
Pcdhga6Q91XY2 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdhga6Q91XY2 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
Pcdhga6Q91XY2 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdhga6Q91XY2 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC21.1■□□□□ 0.97
Pcdhga6Q91XY2 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdhga6Q91XY2 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdhga6Q91XY2 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdhga6Q91XY2 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdhga6Q91XY2 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdhga6Q91XY2 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdhga6Q91XY2 Gm28536-201ENSMUST00000190971 1317 ntBASIC21.09■□□□□ 0.97
Pcdhga6Q91XY2 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Pcdhga6Q91XY2 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC21.09■□□□□ 0.97
Pcdhga6Q91XY2 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Pcdhga6Q91XY2 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdhga6Q91XY2 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC21.09■□□□□ 0.97
Pcdhga6Q91XY2 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdhga6Q91XY2 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC21.08■□□□□ 0.97
Pcdhga6Q91XY2 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC21.08■□□□□ 0.97
Pcdhga6Q91XY2 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Pcdhga6Q91XY2 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
Pcdhga6Q91XY2 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Pcdhga6Q91XY2 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Pcdhga6Q91XY2 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Pcdhga6Q91XY2 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdhga6Q91XY2 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdhga6Q91XY2 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdhga6Q91XY2 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC21.07■□□□□ 0.96
Pcdhga6Q91XY2 Gm8495-201ENSMUST00000188740 694 ntBASIC21.07■□□□□ 0.96
Pcdhga6Q91XY2 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdhga6Q91XY2 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Pcdhga6Q91XY2 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdhga6Q91XY2 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Pcdhga6Q91XY2 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC21.05■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms