Protein–RNA interactions for Protein: Q91XX6

Pcdhgb4, Protocadherin gamma B4, mousemouse

Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb4Q91XX6 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Pcdhgb4Q91XX6 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Pcdhgb4Q91XX6 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC22.69■■□□□ 1.22
Pcdhgb4Q91XX6 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Pcdhgb4Q91XX6 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Pcdhgb4Q91XX6 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC22.69■■□□□ 1.22
Pcdhgb4Q91XX6 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Pcdhgb4Q91XX6 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC22.69■■□□□ 1.22
Pcdhgb4Q91XX6 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Pcdhgb4Q91XX6 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
Pcdhgb4Q91XX6 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Pcdhgb4Q91XX6 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Pcdhgb4Q91XX6 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
Pcdhgb4Q91XX6 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC22.67■■□□□ 1.22
Pcdhgb4Q91XX6 Gm12366-201ENSMUST00000121722 873 ntBASIC22.67■■□□□ 1.22
Pcdhgb4Q91XX6 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Pcdhgb4Q91XX6 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC22.67■■□□□ 1.22
Pcdhgb4Q91XX6 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Pcdhgb4Q91XX6 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
Pcdhgb4Q91XX6 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Pcdhgb4Q91XX6 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC22.67■■□□□ 1.22
Pcdhgb4Q91XX6 Gm5786-201ENSMUST00000085368 882 ntBASIC22.67■■□□□ 1.22
Pcdhgb4Q91XX6 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Pcdhgb4Q91XX6 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Pcdhgb4Q91XX6 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Pcdhgb4Q91XX6 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Pcdhgb4Q91XX6 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC22.66■■□□□ 1.22
Pcdhgb4Q91XX6 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Pcdhgb4Q91XX6 Mir6538-201ENSMUST00000183713 110 ntBASIC22.66■■□□□ 1.22
Pcdhgb4Q91XX6 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Pcdhgb4Q91XX6 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
Pcdhgb4Q91XX6 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Pcdhgb4Q91XX6 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Pcdhgb4Q91XX6 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Pcdhgb4Q91XX6 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Pcdhgb4Q91XX6 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Pcdhgb4Q91XX6 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
Pcdhgb4Q91XX6 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Pcdhgb4Q91XX6 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Pcdhgb4Q91XX6 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Pcdhgb4Q91XX6 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Pcdhgb4Q91XX6 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Pcdhgb4Q91XX6 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Pcdhgb4Q91XX6 Gm6277-202ENSMUST00000224036 2779 ntBASIC22.64■■□□□ 1.21
Pcdhgb4Q91XX6 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Pcdhgb4Q91XX6 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.21
Pcdhgb4Q91XX6 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Pcdhgb4Q91XX6 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
Pcdhgb4Q91XX6 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Pcdhgb4Q91XX6 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC22.63■■□□□ 1.21
Pcdhgb4Q91XX6 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Pcdhgb4Q91XX6 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Pcdhgb4Q91XX6 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC22.63■■□□□ 1.21
Pcdhgb4Q91XX6 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Pcdhgb4Q91XX6 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
Pcdhgb4Q91XX6 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Pcdhgb4Q91XX6 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
Pcdhgb4Q91XX6 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Pcdhgb4Q91XX6 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Pcdhgb4Q91XX6 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC22.61■■□□□ 1.21
Pcdhgb4Q91XX6 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
Pcdhgb4Q91XX6 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Pcdhgb4Q91XX6 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Pcdhgb4Q91XX6 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Pcdhgb4Q91XX6 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Pcdhgb4Q91XX6 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Pcdhgb4Q91XX6 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Pcdhgb4Q91XX6 Gm13042-201ENSMUST00000119244 1955 ntBASIC22.6■■□□□ 1.21
Pcdhgb4Q91XX6 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Pcdhgb4Q91XX6 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Pcdhgb4Q91XX6 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC22.6■■□□□ 1.21
Pcdhgb4Q91XX6 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Pcdhgb4Q91XX6 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Pcdhgb4Q91XX6 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC22.59■■□□□ 1.21
Pcdhgb4Q91XX6 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Pcdhgb4Q91XX6 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC22.58■■□□□ 1.21
Pcdhgb4Q91XX6 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Pcdhgb4Q91XX6 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Pcdhgb4Q91XX6 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Pcdhgb4Q91XX6 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
Pcdhgb4Q91XX6 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC22.58■■□□□ 1.2
Pcdhgb4Q91XX6 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.2
Pcdhgb4Q91XX6 Gm37415-201ENSMUST00000192265 2054 ntBASIC22.58■■□□□ 1.2
Pcdhgb4Q91XX6 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC22.57■■□□□ 1.2
Pcdhgb4Q91XX6 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Pcdhgb4Q91XX6 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Pcdhgb4Q91XX6 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Pcdhgb4Q91XX6 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Pcdhgb4Q91XX6 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC22.57■■□□□ 1.2
Pcdhgb4Q91XX6 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC22.57■■□□□ 1.2
Pcdhgb4Q91XX6 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
Pcdhgb4Q91XX6 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Pcdhgb4Q91XX6 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Pcdhgb4Q91XX6 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Pcdhgb4Q91XX6 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC22.56■■□□□ 1.2
Pcdhgb4Q91XX6 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Pcdhgb4Q91XX6 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
Pcdhgb4Q91XX6 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Pcdhgb4Q91XX6 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Pcdhgb4Q91XX6 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC22.55■■□□□ 1.2
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms