Protein–RNA interactions for Protein: Q91XX5

Pcdhgb5, Protocadherin gamma B5, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb5Q91XX5 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC21.38■■□□□ 1.01
Pcdhgb5Q91XX5 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdhgb5Q91XX5 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdhgb5Q91XX5 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdhgb5Q91XX5 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdhgb5Q91XX5 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC21.37■■□□□ 1.01
Pcdhgb5Q91XX5 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Pcdhgb5Q91XX5 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdhgb5Q91XX5 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdhgb5Q91XX5 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdhgb5Q91XX5 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdhgb5Q91XX5 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC21.36■■□□□ 1.01
Pcdhgb5Q91XX5 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC21.36■■□□□ 1.01
Pcdhgb5Q91XX5 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdhgb5Q91XX5 Gm13241-201ENSMUST00000094493 780 ntBASIC21.36■■□□□ 1.01
Pcdhgb5Q91XX5 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC21.36■■□□□ 1.01
Pcdhgb5Q91XX5 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdhgb5Q91XX5 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdhgb5Q91XX5 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdhgb5Q91XX5 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdhgb5Q91XX5 Gm22238-201ENSMUST00000175222 88 ntBASIC21.35■■□□□ 1.01
Pcdhgb5Q91XX5 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdhgb5Q91XX5 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdhgb5Q91XX5 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Pcdhgb5Q91XX5 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdhgb5Q91XX5 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdhgb5Q91XX5 Gm8093-201ENSMUST00000128935 1892 ntBASIC21.34■■□□□ 1.01
Pcdhgb5Q91XX5 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC21.33■■□□□ 1.01
Pcdhgb5Q91XX5 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC21.33■■□□□ 1.01
Pcdhgb5Q91XX5 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
Pcdhgb5Q91XX5 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pcdhgb5Q91XX5 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Pcdhgb5Q91XX5 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC21.32■■□□□ 1
Pcdhgb5Q91XX5 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdhgb5Q91XX5 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC21.32■■□□□ 1
Pcdhgb5Q91XX5 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdhgb5Q91XX5 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdhgb5Q91XX5 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdhgb5Q91XX5 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdhgb5Q91XX5 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdhgb5Q91XX5 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC21.31■■□□□ 1
Pcdhgb5Q91XX5 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Pcdhgb5Q91XX5 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC21.31■■□□□ 1
Pcdhgb5Q91XX5 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdhgb5Q91XX5 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
Pcdhgb5Q91XX5 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Pcdhgb5Q91XX5 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC21.3■■□□□ 1
Pcdhgb5Q91XX5 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Pcdhgb5Q91XX5 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC21.3■■□□□ 1
Pcdhgb5Q91XX5 Gm9847-201ENSMUST00000052528 599 ntBASIC21.3■■□□□ 1
Pcdhgb5Q91XX5 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Pcdhgb5Q91XX5 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Pcdhgb5Q91XX5 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Pcdhgb5Q91XX5 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC21.3■■□□□ 1
Pcdhgb5Q91XX5 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdhgb5Q91XX5 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdhgb5Q91XX5 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdhgb5Q91XX5 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC21.29■■□□□ 1
Pcdhgb5Q91XX5 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdhgb5Q91XX5 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdhgb5Q91XX5 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdhgb5Q91XX5 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC21.29■■□□□ 1
Pcdhgb5Q91XX5 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdhgb5Q91XX5 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Pcdhgb5Q91XX5 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdhgb5Q91XX5 Gm43034-201ENSMUST00000198678 1364 ntBASIC21.28■■□□□ 1
Pcdhgb5Q91XX5 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdhgb5Q91XX5 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdhgb5Q91XX5 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC21.28■■□□□ 1
Pcdhgb5Q91XX5 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdhgb5Q91XX5 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdhgb5Q91XX5 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdhgb5Q91XX5 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC21.27■■□□□ 1
Pcdhgb5Q91XX5 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Pcdhgb5Q91XX5 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC21.27■■□□□ 1
Pcdhgb5Q91XX5 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdhgb5Q91XX5 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdhgb5Q91XX5 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdhgb5Q91XX5 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdhgb5Q91XX5 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdhgb5Q91XX5 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdhgb5Q91XX5 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdhgb5Q91XX5 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdhgb5Q91XX5 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdhgb5Q91XX5 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdhgb5Q91XX5 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdhgb5Q91XX5 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdhgb5Q91XX5 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdhgb5Q91XX5 Gm6934-201ENSMUST00000194780 1905 ntBASIC21.23■□□□□ 0.99
Pcdhgb5Q91XX5 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdhgb5Q91XX5 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdhgb5Q91XX5 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdhgb5Q91XX5 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdhgb5Q91XX5 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC21.23■□□□□ 0.99
Pcdhgb5Q91XX5 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdhgb5Q91XX5 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC21.23■□□□□ 0.99
Pcdhgb5Q91XX5 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Pcdhgb5Q91XX5 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdhgb5Q91XX5 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdhgb5Q91XX5 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms