Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Ndc1Q8VCB1 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Ndc1Q8VCB1 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ndc1Q8VCB1 Gm9959-201ENSMUST00000068277 390 ntBASIC20.18■□□□□ 0.82
Ndc1Q8VCB1 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Ndc1Q8VCB1 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC20.18■□□□□ 0.82
Ndc1Q8VCB1 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ndc1Q8VCB1 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ndc1Q8VCB1 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Ndc1Q8VCB1 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Ndc1Q8VCB1 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Ndc1Q8VCB1 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Ndc1Q8VCB1 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ndc1Q8VCB1 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ndc1Q8VCB1 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ndc1Q8VCB1 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Ndc1Q8VCB1 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Ndc1Q8VCB1 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ndc1Q8VCB1 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ndc1Q8VCB1 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ndc1Q8VCB1 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ndc1Q8VCB1 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC20.15■□□□□ 0.82
Ndc1Q8VCB1 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Ndc1Q8VCB1 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ndc1Q8VCB1 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Ndc1Q8VCB1 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ndc1Q8VCB1 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Ndc1Q8VCB1 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Ndc1Q8VCB1 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.14■□□□□ 0.82
Ndc1Q8VCB1 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ndc1Q8VCB1 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Ndc1Q8VCB1 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ndc1Q8VCB1 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ndc1Q8VCB1 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.13■□□□□ 0.81
Ndc1Q8VCB1 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.13■□□□□ 0.81
Ndc1Q8VCB1 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ndc1Q8VCB1 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ndc1Q8VCB1 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ndc1Q8VCB1 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ndc1Q8VCB1 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Ndc1Q8VCB1 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
Ndc1Q8VCB1 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Ndc1Q8VCB1 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ndc1Q8VCB1 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Ndc1Q8VCB1 Gm16464-201ENSMUST00000117815 1095 ntBASIC20.12■□□□□ 0.81
Ndc1Q8VCB1 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC20.12■□□□□ 0.81
Ndc1Q8VCB1 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ndc1Q8VCB1 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Ndc1Q8VCB1 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC20.12■□□□□ 0.81
Ndc1Q8VCB1 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ndc1Q8VCB1 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ndc1Q8VCB1 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Ndc1Q8VCB1 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ndc1Q8VCB1 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Ndc1Q8VCB1 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC20.11■□□□□ 0.81
Ndc1Q8VCB1 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Ndc1Q8VCB1 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Ndc1Q8VCB1 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Ndc1Q8VCB1 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ndc1Q8VCB1 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ndc1Q8VCB1 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ndc1Q8VCB1 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.1■□□□□ 0.81
Ndc1Q8VCB1 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.1■□□□□ 0.81
Ndc1Q8VCB1 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Ndc1Q8VCB1 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Ndc1Q8VCB1 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ndc1Q8VCB1 Gm28536-201ENSMUST00000190971 1317 ntBASIC20.09■□□□□ 0.81
Ndc1Q8VCB1 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ndc1Q8VCB1 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ndc1Q8VCB1 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ndc1Q8VCB1 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Ndc1Q8VCB1 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ndc1Q8VCB1 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Ndc1Q8VCB1 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ndc1Q8VCB1 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ndc1Q8VCB1 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ndc1Q8VCB1 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Ndc1Q8VCB1 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC20.08■□□□□ 0.81
Ndc1Q8VCB1 Etf1-202ENSMUST00000180351 108 ntBASIC20.08■□□□□ 0.81
Ndc1Q8VCB1 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC20.08■□□□□ 0.8
Ndc1Q8VCB1 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.08■□□□□ 0.8
Ndc1Q8VCB1 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC20.08■□□□□ 0.8
Ndc1Q8VCB1 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.08■□□□□ 0.8
Ndc1Q8VCB1 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Ndc1Q8VCB1 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ndc1Q8VCB1 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ndc1Q8VCB1 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC20.07■□□□□ 0.8
Ndc1Q8VCB1 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ndc1Q8VCB1 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ndc1Q8VCB1 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ndc1Q8VCB1 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ndc1Q8VCB1 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ndc1Q8VCB1 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ndc1Q8VCB1 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC20.06■□□□□ 0.8
Ndc1Q8VCB1 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
Ndc1Q8VCB1 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
Ndc1Q8VCB1 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Ndc1Q8VCB1 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Ndc1Q8VCB1 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ndc1Q8VCB1 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms