Protein–RNA interactions for Protein: Q8R4G9

Chrna3, Neuronal acetylcholine receptor subunit alpha-3, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna3Q8R4G9 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Chrna3Q8R4G9 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Chrna3Q8R4G9 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Chrna3Q8R4G9 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC21.06■□□□□ 0.96
Chrna3Q8R4G9 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Chrna3Q8R4G9 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Chrna3Q8R4G9 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Chrna3Q8R4G9 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Chrna3Q8R4G9 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Chrna3Q8R4G9 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Chrna3Q8R4G9 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Chrna3Q8R4G9 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Chrna3Q8R4G9 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Chrna3Q8R4G9 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Chrna3Q8R4G9 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC21.04■□□□□ 0.96
Chrna3Q8R4G9 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Chrna3Q8R4G9 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Chrna3Q8R4G9 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Chrna3Q8R4G9 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Chrna3Q8R4G9 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Chrna3Q8R4G9 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Chrna3Q8R4G9 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Chrna3Q8R4G9 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Chrna3Q8R4G9 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Chrna3Q8R4G9 Gm28536-201ENSMUST00000190971 1317 ntBASIC21.03■□□□□ 0.96
Chrna3Q8R4G9 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Chrna3Q8R4G9 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Chrna3Q8R4G9 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC21.02■□□□□ 0.96
Chrna3Q8R4G9 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Chrna3Q8R4G9 Gm18755-201ENSMUST00000218030 1099 ntBASIC21.02■□□□□ 0.96
Chrna3Q8R4G9 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC21.02■□□□□ 0.96
Chrna3Q8R4G9 Gm10232-201ENSMUST00000089221 720 ntBASIC21.02■□□□□ 0.96
Chrna3Q8R4G9 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Chrna3Q8R4G9 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.95
Chrna3Q8R4G9 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Chrna3Q8R4G9 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Chrna3Q8R4G9 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Chrna3Q8R4G9 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Chrna3Q8R4G9 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
Chrna3Q8R4G9 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
Chrna3Q8R4G9 Gm16464-201ENSMUST00000117815 1095 ntBASIC21■□□□□ 0.95
Chrna3Q8R4G9 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Chrna3Q8R4G9 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Chrna3Q8R4G9 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Chrna3Q8R4G9 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Chrna3Q8R4G9 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC20.99■□□□□ 0.95
Chrna3Q8R4G9 Gm42501-201ENSMUST00000200220 1026 ntBASIC20.99■□□□□ 0.95
Chrna3Q8R4G9 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Chrna3Q8R4G9 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Chrna3Q8R4G9 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Chrna3Q8R4G9 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Chrna3Q8R4G9 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Chrna3Q8R4G9 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Chrna3Q8R4G9 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC20.98■□□□□ 0.95
Chrna3Q8R4G9 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Chrna3Q8R4G9 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.98■□□□□ 0.95
Chrna3Q8R4G9 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Chrna3Q8R4G9 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Chrna3Q8R4G9 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Chrna3Q8R4G9 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Chrna3Q8R4G9 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Chrna3Q8R4G9 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Chrna3Q8R4G9 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Chrna3Q8R4G9 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Chrna3Q8R4G9 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC20.97■□□□□ 0.95
Chrna3Q8R4G9 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC20.97■□□□□ 0.95
Chrna3Q8R4G9 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Chrna3Q8R4G9 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Chrna3Q8R4G9 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Chrna3Q8R4G9 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Chrna3Q8R4G9 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Chrna3Q8R4G9 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Chrna3Q8R4G9 AC093043.1-201ENSMUST00000226700 898 ntBASIC20.96■□□□□ 0.95
Chrna3Q8R4G9 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Chrna3Q8R4G9 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Chrna3Q8R4G9 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Chrna3Q8R4G9 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Chrna3Q8R4G9 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Chrna3Q8R4G9 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Chrna3Q8R4G9 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Chrna3Q8R4G9 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC20.95■□□□□ 0.94
Chrna3Q8R4G9 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Chrna3Q8R4G9 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
Chrna3Q8R4G9 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Chrna3Q8R4G9 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Chrna3Q8R4G9 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.94■□□□□ 0.94
Chrna3Q8R4G9 Gm11847-201ENSMUST00000125165 1119 ntBASIC20.93■□□□□ 0.94
Chrna3Q8R4G9 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Chrna3Q8R4G9 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC20.93■□□□□ 0.94
Chrna3Q8R4G9 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC20.93■□□□□ 0.94
Chrna3Q8R4G9 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Chrna3Q8R4G9 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Chrna3Q8R4G9 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
Chrna3Q8R4G9 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Chrna3Q8R4G9 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Chrna3Q8R4G9 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Chrna3Q8R4G9 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Chrna3Q8R4G9 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Chrna3Q8R4G9 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Chrna3Q8R4G9 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 72 ms