Protein–RNA interactions for Protein: Q8R429

Atp2a1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp2a1Q8R429 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC24.02■■□□□ 1.44
Atp2a1Q8R429 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
Atp2a1Q8R429 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
Atp2a1Q8R429 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Atp2a1Q8R429 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Atp2a1Q8R429 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Atp2a1Q8R429 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Atp2a1Q8R429 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Atp2a1Q8R429 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC24.01■■□□□ 1.43
Atp2a1Q8R429 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC24■■□□□ 1.43
Atp2a1Q8R429 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC24■■□□□ 1.43
Atp2a1Q8R429 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC24■■□□□ 1.43
Atp2a1Q8R429 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Atp2a1Q8R429 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC24■■□□□ 1.43
Atp2a1Q8R429 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Atp2a1Q8R429 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Atp2a1Q8R429 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC24■■□□□ 1.43
Atp2a1Q8R429 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC24■■□□□ 1.43
Atp2a1Q8R429 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC24■■□□□ 1.43
Atp2a1Q8R429 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Atp2a1Q8R429 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC23.99■■□□□ 1.43
Atp2a1Q8R429 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC23.99■■□□□ 1.43
Atp2a1Q8R429 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC23.99■■□□□ 1.43
Atp2a1Q8R429 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC23.99■■□□□ 1.43
Atp2a1Q8R429 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC23.99■■□□□ 1.43
Atp2a1Q8R429 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Atp2a1Q8R429 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Atp2a1Q8R429 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Atp2a1Q8R429 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Atp2a1Q8R429 Gm15039-201ENSMUST00000118914 875 ntBASIC23.98■■□□□ 1.43
Atp2a1Q8R429 Gm7417-201ENSMUST00000192950 473 ntBASIC23.98■■□□□ 1.43
Atp2a1Q8R429 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC23.98■■□□□ 1.43
Atp2a1Q8R429 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC23.98■■□□□ 1.43
Atp2a1Q8R429 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Atp2a1Q8R429 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC23.97■■□□□ 1.43
Atp2a1Q8R429 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Atp2a1Q8R429 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC23.97■■□□□ 1.43
Atp2a1Q8R429 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Atp2a1Q8R429 Gm6934-201ENSMUST00000194780 1905 ntBASIC23.96■■□□□ 1.43
Atp2a1Q8R429 Gm11847-201ENSMUST00000125165 1119 ntBASIC23.96■■□□□ 1.43
Atp2a1Q8R429 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC23.96■■□□□ 1.43
Atp2a1Q8R429 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Atp2a1Q8R429 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC23.96■■□□□ 1.43
Atp2a1Q8R429 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Atp2a1Q8R429 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Atp2a1Q8R429 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Atp2a1Q8R429 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
Atp2a1Q8R429 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC23.95■■□□□ 1.42
Atp2a1Q8R429 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Atp2a1Q8R429 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC23.95■■□□□ 1.42
Atp2a1Q8R429 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Atp2a1Q8R429 H3f3aos-201ENSMUST00000097448 2905 ntBASIC23.95■■□□□ 1.42
Atp2a1Q8R429 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Atp2a1Q8R429 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Atp2a1Q8R429 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC23.94■■□□□ 1.42
Atp2a1Q8R429 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC23.94■■□□□ 1.42
Atp2a1Q8R429 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC23.94■■□□□ 1.42
Atp2a1Q8R429 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC23.94■■□□□ 1.42
Atp2a1Q8R429 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Atp2a1Q8R429 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Atp2a1Q8R429 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC23.93■■□□□ 1.42
Atp2a1Q8R429 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC23.93■■□□□ 1.42
Atp2a1Q8R429 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC23.93■■□□□ 1.42
Atp2a1Q8R429 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Atp2a1Q8R429 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Atp2a1Q8R429 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Atp2a1Q8R429 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Atp2a1Q8R429 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Atp2a1Q8R429 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Atp2a1Q8R429 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC23.92■■□□□ 1.42
Atp2a1Q8R429 Gm40881-201ENSMUST00000223397 166 ntBASIC23.92■■□□□ 1.42
Atp2a1Q8R429 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
Atp2a1Q8R429 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Atp2a1Q8R429 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Atp2a1Q8R429 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC23.91■■□□□ 1.42
Atp2a1Q8R429 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Atp2a1Q8R429 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Atp2a1Q8R429 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Atp2a1Q8R429 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC23.9■■□□□ 1.42
Atp2a1Q8R429 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC23.9■■□□□ 1.42
Atp2a1Q8R429 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Atp2a1Q8R429 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Atp2a1Q8R429 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Atp2a1Q8R429 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Atp2a1Q8R429 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC23.89■■□□□ 1.42
Atp2a1Q8R429 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Atp2a1Q8R429 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC23.89■■□□□ 1.41
Atp2a1Q8R429 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
Atp2a1Q8R429 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
Atp2a1Q8R429 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.41
Atp2a1Q8R429 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC23.89■■□□□ 1.41
Atp2a1Q8R429 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Atp2a1Q8R429 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC23.88■■□□□ 1.41
Atp2a1Q8R429 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Atp2a1Q8R429 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Atp2a1Q8R429 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC23.88■■□□□ 1.41
Atp2a1Q8R429 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Atp2a1Q8R429 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC23.88■■□□□ 1.41
Atp2a1Q8R429 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Atp2a1Q8R429 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms