Protein–RNA interactions for Protein: Q8R1J1

Tm6sf2, Transmembrane 6 superfamily member 2, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tm6sf2Q8R1J1 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tm6sf2Q8R1J1 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Tm6sf2Q8R1J1 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC20.17■□□□□ 0.82
Tm6sf2Q8R1J1 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tm6sf2Q8R1J1 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tm6sf2Q8R1J1 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tm6sf2Q8R1J1 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tm6sf2Q8R1J1 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Tm6sf2Q8R1J1 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Tm6sf2Q8R1J1 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Tm6sf2Q8R1J1 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tm6sf2Q8R1J1 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tm6sf2Q8R1J1 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tm6sf2Q8R1J1 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Tm6sf2Q8R1J1 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Tm6sf2Q8R1J1 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC20.15■□□□□ 0.82
Tm6sf2Q8R1J1 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tm6sf2Q8R1J1 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tm6sf2Q8R1J1 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tm6sf2Q8R1J1 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tm6sf2Q8R1J1 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Tm6sf2Q8R1J1 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Tm6sf2Q8R1J1 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Tm6sf2Q8R1J1 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Tm6sf2Q8R1J1 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Tm6sf2Q8R1J1 Gm28536-201ENSMUST00000190971 1317 ntBASIC20.14■□□□□ 0.81
Tm6sf2Q8R1J1 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Tm6sf2Q8R1J1 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Tm6sf2Q8R1J1 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Tm6sf2Q8R1J1 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.13■□□□□ 0.81
Tm6sf2Q8R1J1 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tm6sf2Q8R1J1 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tm6sf2Q8R1J1 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Tm6sf2Q8R1J1 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Tm6sf2Q8R1J1 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Tm6sf2Q8R1J1 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Tm6sf2Q8R1J1 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Tm6sf2Q8R1J1 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Tm6sf2Q8R1J1 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Tm6sf2Q8R1J1 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Tm6sf2Q8R1J1 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC20.12■□□□□ 0.81
Tm6sf2Q8R1J1 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC20.12■□□□□ 0.81
Tm6sf2Q8R1J1 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Tm6sf2Q8R1J1 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Tm6sf2Q8R1J1 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC20.11■□□□□ 0.81
Tm6sf2Q8R1J1 Gm10232-201ENSMUST00000089221 720 ntBASIC20.11■□□□□ 0.81
Tm6sf2Q8R1J1 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Tm6sf2Q8R1J1 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
Tm6sf2Q8R1J1 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Tm6sf2Q8R1J1 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Tm6sf2Q8R1J1 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Tm6sf2Q8R1J1 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Tm6sf2Q8R1J1 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC20.1■□□□□ 0.81
Tm6sf2Q8R1J1 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Tm6sf2Q8R1J1 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Tm6sf2Q8R1J1 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
Tm6sf2Q8R1J1 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Tm6sf2Q8R1J1 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC20.09■□□□□ 0.81
Tm6sf2Q8R1J1 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Tm6sf2Q8R1J1 Gm16464-201ENSMUST00000117815 1095 ntBASIC20.09■□□□□ 0.81
Tm6sf2Q8R1J1 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Tm6sf2Q8R1J1 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Tm6sf2Q8R1J1 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Tm6sf2Q8R1J1 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Tm6sf2Q8R1J1 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Tm6sf2Q8R1J1 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Tm6sf2Q8R1J1 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Tm6sf2Q8R1J1 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Tm6sf2Q8R1J1 Gm18755-201ENSMUST00000218030 1099 ntBASIC20.08■□□□□ 0.81
Tm6sf2Q8R1J1 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC20.08■□□□□ 0.81
Tm6sf2Q8R1J1 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Tm6sf2Q8R1J1 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Tm6sf2Q8R1J1 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Tm6sf2Q8R1J1 Gm11847-201ENSMUST00000125165 1119 ntBASIC20.07■□□□□ 0.8
Tm6sf2Q8R1J1 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Tm6sf2Q8R1J1 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Tm6sf2Q8R1J1 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC20.07■□□□□ 0.8
Tm6sf2Q8R1J1 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Tm6sf2Q8R1J1 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Tm6sf2Q8R1J1 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Tm6sf2Q8R1J1 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Tm6sf2Q8R1J1 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Tm6sf2Q8R1J1 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Tm6sf2Q8R1J1 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20.06■□□□□ 0.8
Tm6sf2Q8R1J1 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Tm6sf2Q8R1J1 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Tm6sf2Q8R1J1 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Tm6sf2Q8R1J1 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tm6sf2Q8R1J1 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tm6sf2Q8R1J1 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Tm6sf2Q8R1J1 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tm6sf2Q8R1J1 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tm6sf2Q8R1J1 Gm42501-201ENSMUST00000200220 1026 ntBASIC20.04■□□□□ 0.8
Tm6sf2Q8R1J1 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC20.04■□□□□ 0.8
Tm6sf2Q8R1J1 AC093043.1-201ENSMUST00000226700 898 ntBASIC20.04■□□□□ 0.8
Tm6sf2Q8R1J1 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tm6sf2Q8R1J1 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tm6sf2Q8R1J1 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Tm6sf2Q8R1J1 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.03■□□□□ 0.8
Tm6sf2Q8R1J1 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 568.9 ms