Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Sf3a1Q8K4Z5 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Sf3a1Q8K4Z5 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Sf3a1Q8K4Z5 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Sf3a1Q8K4Z5 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC26.27■■□□□ 1.8
Sf3a1Q8K4Z5 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
Sf3a1Q8K4Z5 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC26.26■■□□□ 1.79
Sf3a1Q8K4Z5 Gm17641-201ENSMUST00000166328 2350 ntBASIC26.26■■□□□ 1.79
Sf3a1Q8K4Z5 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Sf3a1Q8K4Z5 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Sf3a1Q8K4Z5 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC26.25■■□□□ 1.79
Sf3a1Q8K4Z5 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC26.25■■□□□ 1.79
Sf3a1Q8K4Z5 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC26.25■■□□□ 1.79
Sf3a1Q8K4Z5 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Sf3a1Q8K4Z5 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC26.25■■□□□ 1.79
Sf3a1Q8K4Z5 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC26.25■■□□□ 1.79
Sf3a1Q8K4Z5 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Sf3a1Q8K4Z5 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC26.24■■□□□ 1.79
Sf3a1Q8K4Z5 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
Sf3a1Q8K4Z5 Gm43566-201ENSMUST00000196851 808 ntBASIC26.24■■□□□ 1.79
Sf3a1Q8K4Z5 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Sf3a1Q8K4Z5 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC26.24■■□□□ 1.79
Sf3a1Q8K4Z5 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Sf3a1Q8K4Z5 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Sf3a1Q8K4Z5 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Sf3a1Q8K4Z5 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC26.23■■□□□ 1.79
Sf3a1Q8K4Z5 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Sf3a1Q8K4Z5 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC26.23■■□□□ 1.79
Sf3a1Q8K4Z5 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Sf3a1Q8K4Z5 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Sf3a1Q8K4Z5 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Sf3a1Q8K4Z5 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Sf3a1Q8K4Z5 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Sf3a1Q8K4Z5 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Sf3a1Q8K4Z5 AC115037.1-201ENSMUST00000223391 2173 ntBASIC26.22■■□□□ 1.79
Sf3a1Q8K4Z5 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
Sf3a1Q8K4Z5 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC26.2■■□□□ 1.79
Sf3a1Q8K4Z5 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.78
Sf3a1Q8K4Z5 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC26.2■■□□□ 1.78
Sf3a1Q8K4Z5 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC26.2■■□□□ 1.78
Sf3a1Q8K4Z5 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
Sf3a1Q8K4Z5 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Sf3a1Q8K4Z5 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC26.19■■□□□ 1.78
Sf3a1Q8K4Z5 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC26.19■■□□□ 1.78
Sf3a1Q8K4Z5 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC26.19■■□□□ 1.78
Sf3a1Q8K4Z5 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
Sf3a1Q8K4Z5 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Sf3a1Q8K4Z5 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
Sf3a1Q8K4Z5 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Sf3a1Q8K4Z5 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Sf3a1Q8K4Z5 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC26.18■■□□□ 1.78
Sf3a1Q8K4Z5 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
Sf3a1Q8K4Z5 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
Sf3a1Q8K4Z5 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC26.18■■□□□ 1.78
Sf3a1Q8K4Z5 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC26.18■■□□□ 1.78
Sf3a1Q8K4Z5 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
Sf3a1Q8K4Z5 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Sf3a1Q8K4Z5 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Sf3a1Q8K4Z5 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
Sf3a1Q8K4Z5 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
Sf3a1Q8K4Z5 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Sf3a1Q8K4Z5 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Sf3a1Q8K4Z5 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Sf3a1Q8K4Z5 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC26.17■■□□□ 1.78
Sf3a1Q8K4Z5 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC26.17■■□□□ 1.78
Sf3a1Q8K4Z5 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC26.17■■□□□ 1.78
Sf3a1Q8K4Z5 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC26.16■■□□□ 1.78
Sf3a1Q8K4Z5 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Sf3a1Q8K4Z5 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC26.16■■□□□ 1.78
Sf3a1Q8K4Z5 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC26.16■■□□□ 1.78
Sf3a1Q8K4Z5 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC26.16■■□□□ 1.78
Sf3a1Q8K4Z5 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC26.16■■□□□ 1.78
Sf3a1Q8K4Z5 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC26.16■■□□□ 1.78
Sf3a1Q8K4Z5 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Sf3a1Q8K4Z5 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC26.16■■□□□ 1.78
Sf3a1Q8K4Z5 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Sf3a1Q8K4Z5 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC26.16■■□□□ 1.78
Sf3a1Q8K4Z5 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Sf3a1Q8K4Z5 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC26.15■■□□□ 1.78
Sf3a1Q8K4Z5 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Sf3a1Q8K4Z5 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC26.15■■□□□ 1.78
Sf3a1Q8K4Z5 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
Sf3a1Q8K4Z5 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
Sf3a1Q8K4Z5 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC26.14■■□□□ 1.78
Sf3a1Q8K4Z5 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Sf3a1Q8K4Z5 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Sf3a1Q8K4Z5 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC26.14■■□□□ 1.77
Sf3a1Q8K4Z5 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
Sf3a1Q8K4Z5 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC26.14■■□□□ 1.77
Sf3a1Q8K4Z5 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC26.14■■□□□ 1.77
Sf3a1Q8K4Z5 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
Sf3a1Q8K4Z5 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
Sf3a1Q8K4Z5 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC26.13■■□□□ 1.77
Sf3a1Q8K4Z5 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Sf3a1Q8K4Z5 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
Sf3a1Q8K4Z5 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC26.12■■□□□ 1.77
Sf3a1Q8K4Z5 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
Sf3a1Q8K4Z5 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC26.12■■□□□ 1.77
Sf3a1Q8K4Z5 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Sf3a1Q8K4Z5 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC26.11■■□□□ 1.77
Retrieved 100 of 76,532 protein–RNA pairs in 89.6 ms