Protein–RNA interactions for Protein: Q8CIR4

Trpm6, Transient receptor potential cation channel subfamily M member 6, mousemouse

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpm6Q8CIR4 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Trpm6Q8CIR4 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Trpm6Q8CIR4 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Trpm6Q8CIR4 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Trpm6Q8CIR4 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Trpm6Q8CIR4 Gm21956-201ENSMUST00000179946 522 ntBASIC21.8■■□□□ 1.08
Trpm6Q8CIR4 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Trpm6Q8CIR4 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Trpm6Q8CIR4 Gm9847-201ENSMUST00000052528 599 ntBASIC21.8■■□□□ 1.08
Trpm6Q8CIR4 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Trpm6Q8CIR4 Gm13241-201ENSMUST00000094493 780 ntBASIC21.8■■□□□ 1.08
Trpm6Q8CIR4 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Trpm6Q8CIR4 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Trpm6Q8CIR4 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC21.79■■□□□ 1.08
Trpm6Q8CIR4 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Trpm6Q8CIR4 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Trpm6Q8CIR4 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Trpm6Q8CIR4 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Trpm6Q8CIR4 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Trpm6Q8CIR4 Gm12922-201ENSMUST00000120626 809 ntBASIC21.79■■□□□ 1.08
Trpm6Q8CIR4 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Trpm6Q8CIR4 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC21.78■■□□□ 1.08
Trpm6Q8CIR4 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Trpm6Q8CIR4 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Trpm6Q8CIR4 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC21.77■■□□□ 1.08
Trpm6Q8CIR4 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Trpm6Q8CIR4 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Trpm6Q8CIR4 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Trpm6Q8CIR4 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC21.77■■□□□ 1.07
Trpm6Q8CIR4 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.07
Trpm6Q8CIR4 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Trpm6Q8CIR4 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Trpm6Q8CIR4 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Trpm6Q8CIR4 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Trpm6Q8CIR4 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Trpm6Q8CIR4 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC21.75■■□□□ 1.07
Trpm6Q8CIR4 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Trpm6Q8CIR4 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Trpm6Q8CIR4 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Trpm6Q8CIR4 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC21.74■■□□□ 1.07
Trpm6Q8CIR4 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
Trpm6Q8CIR4 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Trpm6Q8CIR4 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC21.73■■□□□ 1.07
Trpm6Q8CIR4 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Trpm6Q8CIR4 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Trpm6Q8CIR4 Gm43034-201ENSMUST00000198678 1364 ntBASIC21.73■■□□□ 1.07
Trpm6Q8CIR4 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Trpm6Q8CIR4 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Trpm6Q8CIR4 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Trpm6Q8CIR4 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Trpm6Q8CIR4 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Trpm6Q8CIR4 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Trpm6Q8CIR4 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Trpm6Q8CIR4 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC21.72■■□□□ 1.07
Trpm6Q8CIR4 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Trpm6Q8CIR4 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Trpm6Q8CIR4 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Trpm6Q8CIR4 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Trpm6Q8CIR4 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC21.71■■□□□ 1.07
Trpm6Q8CIR4 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Trpm6Q8CIR4 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC21.71■■□□□ 1.07
Trpm6Q8CIR4 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC21.71■■□□□ 1.07
Trpm6Q8CIR4 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Trpm6Q8CIR4 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Trpm6Q8CIR4 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Trpm6Q8CIR4 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC21.7■■□□□ 1.06
Trpm6Q8CIR4 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Trpm6Q8CIR4 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
Trpm6Q8CIR4 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Trpm6Q8CIR4 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Trpm6Q8CIR4 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
Trpm6Q8CIR4 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Trpm6Q8CIR4 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Trpm6Q8CIR4 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Trpm6Q8CIR4 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Trpm6Q8CIR4 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Trpm6Q8CIR4 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Trpm6Q8CIR4 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC21.67■■□□□ 1.06
Trpm6Q8CIR4 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Trpm6Q8CIR4 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Trpm6Q8CIR4 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Trpm6Q8CIR4 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC21.66■■□□□ 1.06
Trpm6Q8CIR4 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Trpm6Q8CIR4 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Trpm6Q8CIR4 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Trpm6Q8CIR4 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC21.65■■□□□ 1.06
Trpm6Q8CIR4 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC21.65■■□□□ 1.06
Trpm6Q8CIR4 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC21.65■■□□□ 1.06
Trpm6Q8CIR4 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Trpm6Q8CIR4 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Trpm6Q8CIR4 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Trpm6Q8CIR4 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Trpm6Q8CIR4 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Trpm6Q8CIR4 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC21.65■■□□□ 1.06
Trpm6Q8CIR4 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Trpm6Q8CIR4 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Trpm6Q8CIR4 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Trpm6Q8CIR4 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
Trpm6Q8CIR4 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Trpm6Q8CIR4 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC21.64■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms