Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Gm5921-201ENSMUST00000075898 882 ntBASIC20.09■□□□□ 0.81
Rfwd3Q8CIK8 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rfwd3Q8CIK8 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Rfwd3Q8CIK8 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rfwd3Q8CIK8 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Rfwd3Q8CIK8 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.09■□□□□ 0.81
Rfwd3Q8CIK8 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rfwd3Q8CIK8 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC20.08■□□□□ 0.81
Rfwd3Q8CIK8 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rfwd3Q8CIK8 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
Rfwd3Q8CIK8 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Rfwd3Q8CIK8 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Rfwd3Q8CIK8 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Rfwd3Q8CIK8 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Rfwd3Q8CIK8 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rfwd3Q8CIK8 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Rfwd3Q8CIK8 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Rfwd3Q8CIK8 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rfwd3Q8CIK8 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rfwd3Q8CIK8 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rfwd3Q8CIK8 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rfwd3Q8CIK8 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Rfwd3Q8CIK8 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Rfwd3Q8CIK8 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC20.06■□□□□ 0.8
Rfwd3Q8CIK8 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Rfwd3Q8CIK8 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rfwd3Q8CIK8 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rfwd3Q8CIK8 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC20.05■□□□□ 0.8
Rfwd3Q8CIK8 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Rfwd3Q8CIK8 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Rfwd3Q8CIK8 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Rfwd3Q8CIK8 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rfwd3Q8CIK8 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rfwd3Q8CIK8 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC20.04■□□□□ 0.8
Rfwd3Q8CIK8 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC20.04■□□□□ 0.8
Rfwd3Q8CIK8 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rfwd3Q8CIK8 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rfwd3Q8CIK8 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Rfwd3Q8CIK8 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rfwd3Q8CIK8 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rfwd3Q8CIK8 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rfwd3Q8CIK8 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rfwd3Q8CIK8 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Rfwd3Q8CIK8 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rfwd3Q8CIK8 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC20.03■□□□□ 0.8
Rfwd3Q8CIK8 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC20.03■□□□□ 0.8
Rfwd3Q8CIK8 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.03■□□□□ 0.8
Rfwd3Q8CIK8 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rfwd3Q8CIK8 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rfwd3Q8CIK8 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rfwd3Q8CIK8 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Rfwd3Q8CIK8 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rfwd3Q8CIK8 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rfwd3Q8CIK8 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rfwd3Q8CIK8 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Rfwd3Q8CIK8 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rfwd3Q8CIK8 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rfwd3Q8CIK8 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rfwd3Q8CIK8 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rfwd3Q8CIK8 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC20.02■□□□□ 0.8
Rfwd3Q8CIK8 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC20.02■□□□□ 0.8
Rfwd3Q8CIK8 Nsd1-203ENSMUST00000224156 1149 ntBASIC20.02■□□□□ 0.8
Rfwd3Q8CIK8 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rfwd3Q8CIK8 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Rfwd3Q8CIK8 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Rfwd3Q8CIK8 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Rfwd3Q8CIK8 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Rfwd3Q8CIK8 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Rfwd3Q8CIK8 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rfwd3Q8CIK8 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC20.01■□□□□ 0.79
Rfwd3Q8CIK8 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rfwd3Q8CIK8 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rfwd3Q8CIK8 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Rfwd3Q8CIK8 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rfwd3Q8CIK8 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Rfwd3Q8CIK8 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20■□□□□ 0.79
Rfwd3Q8CIK8 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
Rfwd3Q8CIK8 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rfwd3Q8CIK8 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20■□□□□ 0.79
Rfwd3Q8CIK8 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rfwd3Q8CIK8 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC20■□□□□ 0.79
Rfwd3Q8CIK8 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC20■□□□□ 0.79
Rfwd3Q8CIK8 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC20■□□□□ 0.79
Rfwd3Q8CIK8 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC20■□□□□ 0.79
Rfwd3Q8CIK8 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Rfwd3Q8CIK8 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rfwd3Q8CIK8 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rfwd3Q8CIK8 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rfwd3Q8CIK8 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.99■□□□□ 0.79
Rfwd3Q8CIK8 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC19.99■□□□□ 0.79
Rfwd3Q8CIK8 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
Rfwd3Q8CIK8 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rfwd3Q8CIK8 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC19.99■□□□□ 0.79
Rfwd3Q8CIK8 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Rfwd3Q8CIK8 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC19.99■□□□□ 0.79
Rfwd3Q8CIK8 Gm45444-201ENSMUST00000211394 898 ntBASIC19.99■□□□□ 0.79
Rfwd3Q8CIK8 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rfwd3Q8CIK8 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rfwd3Q8CIK8 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rfwd3Q8CIK8 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms