Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC25.36■■□□□ 1.65
Shisa4Q8CA71 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
Shisa4Q8CA71 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC25.36■■□□□ 1.65
Shisa4Q8CA71 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC25.36■■□□□ 1.65
Shisa4Q8CA71 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
Shisa4Q8CA71 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC25.36■■□□□ 1.65
Shisa4Q8CA71 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Shisa4Q8CA71 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
Shisa4Q8CA71 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC25.35■■□□□ 1.65
Shisa4Q8CA71 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
Shisa4Q8CA71 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Shisa4Q8CA71 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
Shisa4Q8CA71 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC25.34■■□□□ 1.65
Shisa4Q8CA71 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC25.34■■□□□ 1.65
Shisa4Q8CA71 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC25.34■■□□□ 1.65
Shisa4Q8CA71 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Shisa4Q8CA71 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Shisa4Q8CA71 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC25.32■■□□□ 1.64
Shisa4Q8CA71 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC25.32■■□□□ 1.64
Shisa4Q8CA71 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Shisa4Q8CA71 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Shisa4Q8CA71 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC25.32■■□□□ 1.64
Shisa4Q8CA71 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Shisa4Q8CA71 Gm5522-201ENSMUST00000189483 1242 ntBASIC25.31■■□□□ 1.64
Shisa4Q8CA71 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC25.31■■□□□ 1.64
Shisa4Q8CA71 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
Shisa4Q8CA71 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Shisa4Q8CA71 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC25.3■■□□□ 1.64
Shisa4Q8CA71 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC25.3■■□□□ 1.64
Shisa4Q8CA71 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Shisa4Q8CA71 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Shisa4Q8CA71 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC25.29■■□□□ 1.64
Shisa4Q8CA71 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC25.29■■□□□ 1.64
Shisa4Q8CA71 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
Shisa4Q8CA71 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC25.29■■□□□ 1.64
Shisa4Q8CA71 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Shisa4Q8CA71 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC25.29■■□□□ 1.64
Shisa4Q8CA71 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
Shisa4Q8CA71 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC25.29■■□□□ 1.64
Shisa4Q8CA71 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Shisa4Q8CA71 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Shisa4Q8CA71 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Shisa4Q8CA71 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC25.28■■□□□ 1.64
Shisa4Q8CA71 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Shisa4Q8CA71 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Shisa4Q8CA71 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Shisa4Q8CA71 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
Shisa4Q8CA71 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC25.26■■□□□ 1.63
Shisa4Q8CA71 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Shisa4Q8CA71 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC25.26■■□□□ 1.63
Shisa4Q8CA71 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC25.26■■□□□ 1.63
Shisa4Q8CA71 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC25.26■■□□□ 1.63
Shisa4Q8CA71 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC25.26■■□□□ 1.63
Shisa4Q8CA71 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
Shisa4Q8CA71 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC25.26■■□□□ 1.63
Shisa4Q8CA71 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Shisa4Q8CA71 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC25.25■■□□□ 1.63
Shisa4Q8CA71 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Shisa4Q8CA71 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Shisa4Q8CA71 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Shisa4Q8CA71 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC25.24■■□□□ 1.63
Shisa4Q8CA71 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Shisa4Q8CA71 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC25.24■■□□□ 1.63
Shisa4Q8CA71 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Shisa4Q8CA71 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Shisa4Q8CA71 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Shisa4Q8CA71 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC25.22■■□□□ 1.63
Shisa4Q8CA71 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Shisa4Q8CA71 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Shisa4Q8CA71 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC25.22■■□□□ 1.63
Shisa4Q8CA71 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Shisa4Q8CA71 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC25.21■■□□□ 1.63
Shisa4Q8CA71 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Shisa4Q8CA71 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC25.21■■□□□ 1.63
Shisa4Q8CA71 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC25.21■■□□□ 1.63
Shisa4Q8CA71 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
Shisa4Q8CA71 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
Shisa4Q8CA71 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Shisa4Q8CA71 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
Shisa4Q8CA71 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC25.2■■□□□ 1.62
Shisa4Q8CA71 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
Shisa4Q8CA71 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
Shisa4Q8CA71 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC25.19■■□□□ 1.62
Shisa4Q8CA71 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC25.19■■□□□ 1.62
Shisa4Q8CA71 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
Shisa4Q8CA71 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC25.18■■□□□ 1.62
Shisa4Q8CA71 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Shisa4Q8CA71 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC25.18■■□□□ 1.62
Shisa4Q8CA71 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Shisa4Q8CA71 AC093043.1-201ENSMUST00000226700 898 ntBASIC25.18■■□□□ 1.62
Shisa4Q8CA71 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Shisa4Q8CA71 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC25.18■■□□□ 1.62
Shisa4Q8CA71 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Shisa4Q8CA71 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC25.17■■□□□ 1.62
Shisa4Q8CA71 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC25.17■■□□□ 1.62
Shisa4Q8CA71 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC25.17■■□□□ 1.62
Shisa4Q8CA71 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC25.17■■□□□ 1.62
Shisa4Q8CA71 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Shisa4Q8CA71 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC25.17■■□□□ 1.62
Shisa4Q8CA71 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms