Protein–RNA interactions for Protein: Q8CA03

Slc46a2, Thymic stromal cotransporter protein, mousemouse

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc46a2Q8CA03 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Slc46a2Q8CA03 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Slc46a2Q8CA03 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Slc46a2Q8CA03 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Slc46a2Q8CA03 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Slc46a2Q8CA03 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Slc46a2Q8CA03 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.6■□□□□ 0.89
Slc46a2Q8CA03 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Slc46a2Q8CA03 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Slc46a2Q8CA03 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Slc46a2Q8CA03 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.59■□□□□ 0.89
Slc46a2Q8CA03 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Slc46a2Q8CA03 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Slc46a2Q8CA03 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Slc46a2Q8CA03 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Slc46a2Q8CA03 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Slc46a2Q8CA03 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Slc46a2Q8CA03 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Slc46a2Q8CA03 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Slc46a2Q8CA03 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Slc46a2Q8CA03 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Slc46a2Q8CA03 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Slc46a2Q8CA03 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Slc46a2Q8CA03 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Slc46a2Q8CA03 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Slc46a2Q8CA03 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Slc46a2Q8CA03 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Slc46a2Q8CA03 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Slc46a2Q8CA03 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Slc46a2Q8CA03 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
Slc46a2Q8CA03 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Slc46a2Q8CA03 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Slc46a2Q8CA03 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Slc46a2Q8CA03 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Slc46a2Q8CA03 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Slc46a2Q8CA03 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Slc46a2Q8CA03 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Slc46a2Q8CA03 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Slc46a2Q8CA03 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Slc46a2Q8CA03 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Slc46a2Q8CA03 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Slc46a2Q8CA03 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Slc46a2Q8CA03 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Slc46a2Q8CA03 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Slc46a2Q8CA03 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Slc46a2Q8CA03 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Slc46a2Q8CA03 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.53■□□□□ 0.88
Slc46a2Q8CA03 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Slc46a2Q8CA03 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Slc46a2Q8CA03 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Slc46a2Q8CA03 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Slc46a2Q8CA03 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Slc46a2Q8CA03 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.52■□□□□ 0.88
Slc46a2Q8CA03 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Slc46a2Q8CA03 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Slc46a2Q8CA03 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Slc46a2Q8CA03 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC20.52■□□□□ 0.88
Slc46a2Q8CA03 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Slc46a2Q8CA03 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Slc46a2Q8CA03 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC20.52■□□□□ 0.88
Slc46a2Q8CA03 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC20.52■□□□□ 0.87
Slc46a2Q8CA03 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Slc46a2Q8CA03 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC20.52■□□□□ 0.87
Slc46a2Q8CA03 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.51■□□□□ 0.87
Slc46a2Q8CA03 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Slc46a2Q8CA03 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Slc46a2Q8CA03 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Slc46a2Q8CA03 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.5■□□□□ 0.87
Slc46a2Q8CA03 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Slc46a2Q8CA03 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Slc46a2Q8CA03 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Slc46a2Q8CA03 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Slc46a2Q8CA03 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Slc46a2Q8CA03 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC20.49■□□□□ 0.87
Slc46a2Q8CA03 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Slc46a2Q8CA03 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Slc46a2Q8CA03 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Slc46a2Q8CA03 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Slc46a2Q8CA03 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Slc46a2Q8CA03 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Slc46a2Q8CA03 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Slc46a2Q8CA03 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Slc46a2Q8CA03 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Slc46a2Q8CA03 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.47■□□□□ 0.87
Slc46a2Q8CA03 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Slc46a2Q8CA03 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Slc46a2Q8CA03 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Slc46a2Q8CA03 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Slc46a2Q8CA03 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC20.47■□□□□ 0.87
Slc46a2Q8CA03 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Slc46a2Q8CA03 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Slc46a2Q8CA03 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.47■□□□□ 0.87
Slc46a2Q8CA03 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Slc46a2Q8CA03 Gm7432-201ENSMUST00000210343 879 ntBASIC20.46■□□□□ 0.87
Slc46a2Q8CA03 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Slc46a2Q8CA03 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
Slc46a2Q8CA03 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Slc46a2Q8CA03 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Slc46a2Q8CA03 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.45■□□□□ 0.86
Slc46a2Q8CA03 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.45■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms