Protein–RNA interactions for Protein: Q8C7R7

Rfx6, DNA-binding protein RFX6, mousemouse

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx6Q8C7R7 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC21.75■■□□□ 1.07
Rfx6Q8C7R7 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Rfx6Q8C7R7 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Rfx6Q8C7R7 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Rfx6Q8C7R7 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Rfx6Q8C7R7 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Rfx6Q8C7R7 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Rfx6Q8C7R7 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC21.74■■□□□ 1.07
Rfx6Q8C7R7 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC21.74■■□□□ 1.07
Rfx6Q8C7R7 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Rfx6Q8C7R7 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Rfx6Q8C7R7 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Rfx6Q8C7R7 Gm38160-201ENSMUST00000193090 2499 ntBASIC21.74■■□□□ 1.07
Rfx6Q8C7R7 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC21.74■■□□□ 1.07
Rfx6Q8C7R7 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
Rfx6Q8C7R7 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Rfx6Q8C7R7 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Rfx6Q8C7R7 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Rfx6Q8C7R7 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Rfx6Q8C7R7 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Rfx6Q8C7R7 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Rfx6Q8C7R7 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Rfx6Q8C7R7 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
Rfx6Q8C7R7 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Rfx6Q8C7R7 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
Rfx6Q8C7R7 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Rfx6Q8C7R7 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Rfx6Q8C7R7 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC21.72■■□□□ 1.07
Rfx6Q8C7R7 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC21.72■■□□□ 1.07
Rfx6Q8C7R7 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Rfx6Q8C7R7 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rfx6Q8C7R7 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Rfx6Q8C7R7 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
Rfx6Q8C7R7 AC117769.4-201ENSMUST00000225679 685 ntBASIC21.71■■□□□ 1.07
Rfx6Q8C7R7 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Rfx6Q8C7R7 Gm37415-201ENSMUST00000192265 2054 ntBASIC21.71■■□□□ 1.07
Rfx6Q8C7R7 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
Rfx6Q8C7R7 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Rfx6Q8C7R7 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rfx6Q8C7R7 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Rfx6Q8C7R7 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC21.7■■□□□ 1.06
Rfx6Q8C7R7 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rfx6Q8C7R7 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Rfx6Q8C7R7 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rfx6Q8C7R7 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC21.7■■□□□ 1.06
Rfx6Q8C7R7 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rfx6Q8C7R7 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC21.7■■□□□ 1.06
Rfx6Q8C7R7 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC21.7■■□□□ 1.06
Rfx6Q8C7R7 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rfx6Q8C7R7 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rfx6Q8C7R7 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC21.69■■□□□ 1.06
Rfx6Q8C7R7 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Rfx6Q8C7R7 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Rfx6Q8C7R7 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC21.69■■□□□ 1.06
Rfx6Q8C7R7 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC21.69■■□□□ 1.06
Rfx6Q8C7R7 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Rfx6Q8C7R7 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC21.68■■□□□ 1.06
Rfx6Q8C7R7 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC21.68■■□□□ 1.06
Rfx6Q8C7R7 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rfx6Q8C7R7 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rfx6Q8C7R7 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC21.68■■□□□ 1.06
Rfx6Q8C7R7 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Rfx6Q8C7R7 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rfx6Q8C7R7 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC21.67■■□□□ 1.06
Rfx6Q8C7R7 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
Rfx6Q8C7R7 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Rfx6Q8C7R7 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Rfx6Q8C7R7 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC21.66■■□□□ 1.06
Rfx6Q8C7R7 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC21.66■■□□□ 1.06
Rfx6Q8C7R7 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rfx6Q8C7R7 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rfx6Q8C7R7 Gm12504-201ENSMUST00000120860 2231 ntBASIC21.65■■□□□ 1.06
Rfx6Q8C7R7 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rfx6Q8C7R7 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Rfx6Q8C7R7 Scarna2-201ENSMUST00000157560 414 ntBASIC21.65■■□□□ 1.06
Rfx6Q8C7R7 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Rfx6Q8C7R7 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Rfx6Q8C7R7 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Rfx6Q8C7R7 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Rfx6Q8C7R7 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Rfx6Q8C7R7 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
Rfx6Q8C7R7 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Rfx6Q8C7R7 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Rfx6Q8C7R7 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Rfx6Q8C7R7 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
Rfx6Q8C7R7 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC21.63■■□□□ 1.05
Rfx6Q8C7R7 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rfx6Q8C7R7 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rfx6Q8C7R7 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC21.63■■□□□ 1.05
Rfx6Q8C7R7 Gm16437-201ENSMUST00000025669 507 ntBASIC21.63■■□□□ 1.05
Rfx6Q8C7R7 Gm42418-201ENSMUST00000182010 1831 ntBASIC21.63■■□□□ 1.05
Rfx6Q8C7R7 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Rfx6Q8C7R7 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rfx6Q8C7R7 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Rfx6Q8C7R7 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Rfx6Q8C7R7 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Rfx6Q8C7R7 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC21.62■■□□□ 1.05
Rfx6Q8C7R7 Gm9806-201ENSMUST00000051080 552 ntBASIC21.62■■□□□ 1.05
Rfx6Q8C7R7 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Rfx6Q8C7R7 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 171.7 ms