Protein–RNA interactions for Protein: Q8C3L1

Ssuh2, Protein SSUH2 homolog, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssuh2Q8C3L1 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ssuh2Q8C3L1 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.83■□□□□ 0.77
Ssuh2Q8C3L1 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Ssuh2Q8C3L1 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ssuh2Q8C3L1 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC19.83■□□□□ 0.76
Ssuh2Q8C3L1 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ssuh2Q8C3L1 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Ssuh2Q8C3L1 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ssuh2Q8C3L1 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ssuh2Q8C3L1 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ssuh2Q8C3L1 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ssuh2Q8C3L1 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Ssuh2Q8C3L1 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ssuh2Q8C3L1 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Ssuh2Q8C3L1 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ssuh2Q8C3L1 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Ssuh2Q8C3L1 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ssuh2Q8C3L1 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC19.81■□□□□ 0.76
Ssuh2Q8C3L1 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ssuh2Q8C3L1 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Ssuh2Q8C3L1 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.8■□□□□ 0.76
Ssuh2Q8C3L1 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Ssuh2Q8C3L1 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC19.8■□□□□ 0.76
Ssuh2Q8C3L1 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ssuh2Q8C3L1 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ssuh2Q8C3L1 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC19.8■□□□□ 0.76
Ssuh2Q8C3L1 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ssuh2Q8C3L1 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ssuh2Q8C3L1 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Ssuh2Q8C3L1 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC19.79■□□□□ 0.76
Ssuh2Q8C3L1 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC19.79■□□□□ 0.76
Ssuh2Q8C3L1 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ssuh2Q8C3L1 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ssuh2Q8C3L1 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ssuh2Q8C3L1 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ssuh2Q8C3L1 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Ssuh2Q8C3L1 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Ssuh2Q8C3L1 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ssuh2Q8C3L1 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ssuh2Q8C3L1 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ssuh2Q8C3L1 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ssuh2Q8C3L1 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ssuh2Q8C3L1 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ssuh2Q8C3L1 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ssuh2Q8C3L1 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ssuh2Q8C3L1 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.78■□□□□ 0.76
Ssuh2Q8C3L1 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ssuh2Q8C3L1 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC19.77■□□□□ 0.76
Ssuh2Q8C3L1 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ssuh2Q8C3L1 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC19.77■□□□□ 0.76
Ssuh2Q8C3L1 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ssuh2Q8C3L1 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC19.77■□□□□ 0.76
Ssuh2Q8C3L1 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Ssuh2Q8C3L1 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ssuh2Q8C3L1 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ssuh2Q8C3L1 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Ssuh2Q8C3L1 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ssuh2Q8C3L1 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Ssuh2Q8C3L1 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ssuh2Q8C3L1 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ssuh2Q8C3L1 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ssuh2Q8C3L1 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ssuh2Q8C3L1 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC19.75■□□□□ 0.75
Ssuh2Q8C3L1 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ssuh2Q8C3L1 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ssuh2Q8C3L1 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ssuh2Q8C3L1 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Ssuh2Q8C3L1 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ssuh2Q8C3L1 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ssuh2Q8C3L1 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ssuh2Q8C3L1 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ssuh2Q8C3L1 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ssuh2Q8C3L1 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ssuh2Q8C3L1 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC19.73■□□□□ 0.75
Ssuh2Q8C3L1 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ssuh2Q8C3L1 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ssuh2Q8C3L1 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Ssuh2Q8C3L1 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ssuh2Q8C3L1 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ssuh2Q8C3L1 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC19.72■□□□□ 0.75
Ssuh2Q8C3L1 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
Ssuh2Q8C3L1 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Ssuh2Q8C3L1 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ssuh2Q8C3L1 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Ssuh2Q8C3L1 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ssuh2Q8C3L1 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ssuh2Q8C3L1 Etf1-202ENSMUST00000180351 108 ntBASIC19.71■□□□□ 0.75
Ssuh2Q8C3L1 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ssuh2Q8C3L1 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ssuh2Q8C3L1 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Ssuh2Q8C3L1 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ssuh2Q8C3L1 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Ssuh2Q8C3L1 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ssuh2Q8C3L1 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ssuh2Q8C3L1 Gm13241-201ENSMUST00000094493 780 ntBASIC19.7■□□□□ 0.74
Ssuh2Q8C3L1 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Ssuh2Q8C3L1 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Ssuh2Q8C3L1 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ssuh2Q8C3L1 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ssuh2Q8C3L1 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms