Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tsen54Q8C2A2 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tsen54Q8C2A2 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC17.79■□□□□ 0.44
Tsen54Q8C2A2 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Tsen54Q8C2A2 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC17.79■□□□□ 0.44
Tsen54Q8C2A2 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tsen54Q8C2A2 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Tsen54Q8C2A2 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tsen54Q8C2A2 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tsen54Q8C2A2 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tsen54Q8C2A2 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC17.78■□□□□ 0.44
Tsen54Q8C2A2 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tsen54Q8C2A2 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC17.78■□□□□ 0.44
Tsen54Q8C2A2 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tsen54Q8C2A2 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Tsen54Q8C2A2 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tsen54Q8C2A2 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tsen54Q8C2A2 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tsen54Q8C2A2 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tsen54Q8C2A2 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tsen54Q8C2A2 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Tsen54Q8C2A2 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
Tsen54Q8C2A2 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Tsen54Q8C2A2 Gm14121-201ENSMUST00000121441 1380 ntBASIC17.77■□□□□ 0.43
Tsen54Q8C2A2 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
Tsen54Q8C2A2 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Tsen54Q8C2A2 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Tsen54Q8C2A2 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tsen54Q8C2A2 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tsen54Q8C2A2 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Tsen54Q8C2A2 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Tsen54Q8C2A2 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Tsen54Q8C2A2 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tsen54Q8C2A2 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Tsen54Q8C2A2 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tsen54Q8C2A2 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
Tsen54Q8C2A2 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tsen54Q8C2A2 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
Tsen54Q8C2A2 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Tsen54Q8C2A2 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tsen54Q8C2A2 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Tsen54Q8C2A2 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Tsen54Q8C2A2 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tsen54Q8C2A2 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Tsen54Q8C2A2 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC17.74■□□□□ 0.43
Tsen54Q8C2A2 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Tsen54Q8C2A2 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tsen54Q8C2A2 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Tsen54Q8C2A2 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tsen54Q8C2A2 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tsen54Q8C2A2 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tsen54Q8C2A2 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC17.73■□□□□ 0.43
Tsen54Q8C2A2 Gm4430-201ENSMUST00000192413 1943 ntBASIC17.73■□□□□ 0.43
Tsen54Q8C2A2 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Tsen54Q8C2A2 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tsen54Q8C2A2 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tsen54Q8C2A2 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC17.73■□□□□ 0.43
Tsen54Q8C2A2 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Tsen54Q8C2A2 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tsen54Q8C2A2 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tsen54Q8C2A2 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Tsen54Q8C2A2 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC17.72■□□□□ 0.43
Tsen54Q8C2A2 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC17.72■□□□□ 0.43
Tsen54Q8C2A2 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tsen54Q8C2A2 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Tsen54Q8C2A2 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
Tsen54Q8C2A2 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tsen54Q8C2A2 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tsen54Q8C2A2 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tsen54Q8C2A2 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tsen54Q8C2A2 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Tsen54Q8C2A2 AC167019.3-201ENSMUST00000228225 1266 ntBASIC17.71■□□□□ 0.43
Tsen54Q8C2A2 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tsen54Q8C2A2 Gm4799-201ENSMUST00000095396 657 ntBASIC17.71■□□□□ 0.43
Tsen54Q8C2A2 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tsen54Q8C2A2 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.42
Tsen54Q8C2A2 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Tsen54Q8C2A2 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC17.7■□□□□ 0.42
Tsen54Q8C2A2 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Tsen54Q8C2A2 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Tsen54Q8C2A2 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tsen54Q8C2A2 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Tsen54Q8C2A2 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tsen54Q8C2A2 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tsen54Q8C2A2 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tsen54Q8C2A2 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC17.68■□□□□ 0.42
Tsen54Q8C2A2 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC17.68■□□□□ 0.42
Tsen54Q8C2A2 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC17.68■□□□□ 0.42
Tsen54Q8C2A2 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tsen54Q8C2A2 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tsen54Q8C2A2 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC17.68■□□□□ 0.42
Tsen54Q8C2A2 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tsen54Q8C2A2 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tsen54Q8C2A2 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Tsen54Q8C2A2 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Tsen54Q8C2A2 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Tsen54Q8C2A2 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC17.67■□□□□ 0.42
Tsen54Q8C2A2 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tsen54Q8C2A2 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Tsen54Q8C2A2 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms