Protein–RNA interactions for Protein: Q8C263

Ska3, Spindle and kinetochore-associated protein 3, mousemouse

Predictions only

Length 411 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska3Q8C263 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Ska3Q8C263 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ska3Q8C263 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ska3Q8C263 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Ska3Q8C263 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Ska3Q8C263 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ska3Q8C263 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC20.14■□□□□ 0.81
Ska3Q8C263 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC20.14■□□□□ 0.81
Ska3Q8C263 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ska3Q8C263 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ska3Q8C263 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ska3Q8C263 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ska3Q8C263 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Ska3Q8C263 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Ska3Q8C263 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ska3Q8C263 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Ska3Q8C263 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Ska3Q8C263 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC20.13■□□□□ 0.81
Ska3Q8C263 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC20.13■□□□□ 0.81
Ska3Q8C263 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ska3Q8C263 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ska3Q8C263 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ska3Q8C263 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ska3Q8C263 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ska3Q8C263 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ska3Q8C263 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ska3Q8C263 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ska3Q8C263 Nsd1-203ENSMUST00000224156 1149 ntBASIC20.12■□□□□ 0.81
Ska3Q8C263 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ska3Q8C263 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ska3Q8C263 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Ska3Q8C263 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Ska3Q8C263 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Ska3Q8C263 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ska3Q8C263 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Ska3Q8C263 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ska3Q8C263 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Ska3Q8C263 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Ska3Q8C263 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.11■□□□□ 0.81
Ska3Q8C263 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC20.11■□□□□ 0.81
Ska3Q8C263 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ska3Q8C263 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Ska3Q8C263 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Ska3Q8C263 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC20.1■□□□□ 0.81
Ska3Q8C263 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Ska3Q8C263 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ska3Q8C263 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ska3Q8C263 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ska3Q8C263 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Ska3Q8C263 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Ska3Q8C263 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Ska3Q8C263 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ska3Q8C263 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC20.09■□□□□ 0.81
Ska3Q8C263 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC20.09■□□□□ 0.81
Ska3Q8C263 Gm45444-201ENSMUST00000211394 898 ntBASIC20.09■□□□□ 0.81
Ska3Q8C263 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ska3Q8C263 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Ska3Q8C263 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ska3Q8C263 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ska3Q8C263 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Ska3Q8C263 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Ska3Q8C263 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ska3Q8C263 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC20.08■□□□□ 0.8
Ska3Q8C263 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Ska3Q8C263 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ska3Q8C263 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ska3Q8C263 Nsd1-206ENSMUST00000224918 1001 ntBASIC20.07■□□□□ 0.8
Ska3Q8C263 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ska3Q8C263 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ska3Q8C263 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Ska3Q8C263 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ska3Q8C263 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ska3Q8C263 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ska3Q8C263 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.06■□□□□ 0.8
Ska3Q8C263 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Ska3Q8C263 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC20.06■□□□□ 0.8
Ska3Q8C263 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Ska3Q8C263 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ska3Q8C263 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ska3Q8C263 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ska3Q8C263 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ska3Q8C263 Dmtn-209ENSMUST00000228295 2572 ntBASIC20.06■□□□□ 0.8
Ska3Q8C263 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ska3Q8C263 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ska3Q8C263 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Ska3Q8C263 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ska3Q8C263 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ska3Q8C263 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ska3Q8C263 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Ska3Q8C263 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ska3Q8C263 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Ska3Q8C263 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Ska3Q8C263 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
Ska3Q8C263 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ska3Q8C263 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Ska3Q8C263 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Ska3Q8C263 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
Ska3Q8C263 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.05■□□□□ 0.8
Ska3Q8C263 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ska3Q8C263 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 80.8 ms