Protein–RNA interactions for Protein: Q8BYH8

Chd9, Chromodomain-helicase-DNA-binding protein 9, mousemouse

Predictions only

Length 2,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd9Q8BYH8 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC17.33■□□□□ 0.36
Chd9Q8BYH8 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Chd9Q8BYH8 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Chd9Q8BYH8 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Chd9Q8BYH8 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Chd9Q8BYH8 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chd9Q8BYH8 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chd9Q8BYH8 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chd9Q8BYH8 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chd9Q8BYH8 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chd9Q8BYH8 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chd9Q8BYH8 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC17.32■□□□□ 0.36
Chd9Q8BYH8 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chd9Q8BYH8 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Chd9Q8BYH8 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC17.31■□□□□ 0.36
Chd9Q8BYH8 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chd9Q8BYH8 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC17.31■□□□□ 0.36
Chd9Q8BYH8 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC17.31■□□□□ 0.36
Chd9Q8BYH8 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC17.31■□□□□ 0.36
Chd9Q8BYH8 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chd9Q8BYH8 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Chd9Q8BYH8 Mir7071-201ENSMUST00000184847 69 ntBASIC17.3■□□□□ 0.36
Chd9Q8BYH8 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Chd9Q8BYH8 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chd9Q8BYH8 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chd9Q8BYH8 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC17.3■□□□□ 0.36
Chd9Q8BYH8 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
Chd9Q8BYH8 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC17.3■□□□□ 0.36
Chd9Q8BYH8 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC17.3■□□□□ 0.36
Chd9Q8BYH8 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Chd9Q8BYH8 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Chd9Q8BYH8 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Chd9Q8BYH8 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chd9Q8BYH8 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chd9Q8BYH8 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chd9Q8BYH8 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Chd9Q8BYH8 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chd9Q8BYH8 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chd9Q8BYH8 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC17.29■□□□□ 0.36
Chd9Q8BYH8 Gm42569-201ENSMUST00000200539 472 ntBASIC17.29■□□□□ 0.36
Chd9Q8BYH8 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Chd9Q8BYH8 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chd9Q8BYH8 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Chd9Q8BYH8 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC17.28■□□□□ 0.36
Chd9Q8BYH8 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC17.28■□□□□ 0.36
Chd9Q8BYH8 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Chd9Q8BYH8 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC17.28■□□□□ 0.36
Chd9Q8BYH8 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chd9Q8BYH8 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Chd9Q8BYH8 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Chd9Q8BYH8 Gm7977-201ENSMUST00000193787 748 ntBASIC17.27■□□□□ 0.36
Chd9Q8BYH8 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC17.27■□□□□ 0.36
Chd9Q8BYH8 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Chd9Q8BYH8 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Chd9Q8BYH8 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Chd9Q8BYH8 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Chd9Q8BYH8 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Chd9Q8BYH8 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Chd9Q8BYH8 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Chd9Q8BYH8 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC17.26■□□□□ 0.35
Chd9Q8BYH8 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Chd9Q8BYH8 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chd9Q8BYH8 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chd9Q8BYH8 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Chd9Q8BYH8 AC158538.1-201ENSMUST00000225870 294 ntBASIC17.26■□□□□ 0.35
Chd9Q8BYH8 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chd9Q8BYH8 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chd9Q8BYH8 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC17.25■□□□□ 0.35
Chd9Q8BYH8 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chd9Q8BYH8 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Chd9Q8BYH8 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC17.24■□□□□ 0.35
Chd9Q8BYH8 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Chd9Q8BYH8 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Chd9Q8BYH8 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC17.24■□□□□ 0.35
Chd9Q8BYH8 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Chd9Q8BYH8 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Chd9Q8BYH8 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Chd9Q8BYH8 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Chd9Q8BYH8 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC17.23■□□□□ 0.35
Chd9Q8BYH8 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC17.23■□□□□ 0.35
Chd9Q8BYH8 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC17.23■□□□□ 0.35
Chd9Q8BYH8 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC17.23■□□□□ 0.35
Chd9Q8BYH8 AC130671.1-201ENSMUST00000227384 1237 ntBASIC17.23■□□□□ 0.35
Chd9Q8BYH8 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC17.23■□□□□ 0.35
Chd9Q8BYH8 AC135963.1-201ENSMUST00000211640 717 ntBASIC17.23■□□□□ 0.35
Chd9Q8BYH8 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chd9Q8BYH8 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC17.22■□□□□ 0.35
Chd9Q8BYH8 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chd9Q8BYH8 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Chd9Q8BYH8 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Chd9Q8BYH8 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Chd9Q8BYH8 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC17.22■□□□□ 0.35
Chd9Q8BYH8 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC17.21■□□□□ 0.35
Chd9Q8BYH8 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Chd9Q8BYH8 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Chd9Q8BYH8 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Chd9Q8BYH8 Gm10252-201ENSMUST00000209541 832 ntBASIC17.21■□□□□ 0.35
Chd9Q8BYH8 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Chd9Q8BYH8 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Chd9Q8BYH8 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 61.4 ms