Protein–RNA interactions for Protein: Q8BV79

Trank1, TPR and ankyrin repeat-containing protein 1, mousemouse

Predictions only

Length 2,999 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trank1Q8BV79 Gm6139-201ENSMUST00000079261 882 ntBASIC19■□□□□ 0.63
Trank1Q8BV79 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trank1Q8BV79 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trank1Q8BV79 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC18.99■□□□□ 0.63
Trank1Q8BV79 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trank1Q8BV79 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trank1Q8BV79 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trank1Q8BV79 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Trank1Q8BV79 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC18.99■□□□□ 0.63
Trank1Q8BV79 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trank1Q8BV79 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trank1Q8BV79 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC18.98■□□□□ 0.63
Trank1Q8BV79 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Trank1Q8BV79 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trank1Q8BV79 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Trank1Q8BV79 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trank1Q8BV79 Gm11847-201ENSMUST00000125165 1119 ntBASIC18.98■□□□□ 0.63
Trank1Q8BV79 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
Trank1Q8BV79 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trank1Q8BV79 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trank1Q8BV79 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trank1Q8BV79 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC18.97■□□□□ 0.63
Trank1Q8BV79 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trank1Q8BV79 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trank1Q8BV79 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trank1Q8BV79 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trank1Q8BV79 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trank1Q8BV79 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trank1Q8BV79 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trank1Q8BV79 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trank1Q8BV79 Spcs1-207ENSMUST00000228767 1008 ntBASIC18.96■□□□□ 0.63
Trank1Q8BV79 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trank1Q8BV79 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trank1Q8BV79 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trank1Q8BV79 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trank1Q8BV79 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trank1Q8BV79 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC18.95■□□□□ 0.62
Trank1Q8BV79 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trank1Q8BV79 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trank1Q8BV79 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Trank1Q8BV79 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Trank1Q8BV79 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Trank1Q8BV79 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trank1Q8BV79 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trank1Q8BV79 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Trank1Q8BV79 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trank1Q8BV79 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trank1Q8BV79 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trank1Q8BV79 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trank1Q8BV79 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC18.93■□□□□ 0.62
Trank1Q8BV79 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Trank1Q8BV79 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Trank1Q8BV79 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trank1Q8BV79 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trank1Q8BV79 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trank1Q8BV79 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trank1Q8BV79 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trank1Q8BV79 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trank1Q8BV79 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trank1Q8BV79 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trank1Q8BV79 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
Trank1Q8BV79 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trank1Q8BV79 Gm2011-201ENSMUST00000203124 1263 ntBASIC18.92■□□□□ 0.62
Trank1Q8BV79 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Trank1Q8BV79 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Trank1Q8BV79 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC18.91■□□□□ 0.62
Trank1Q8BV79 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC18.91■□□□□ 0.62
Trank1Q8BV79 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trank1Q8BV79 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Trank1Q8BV79 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trank1Q8BV79 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC18.9■□□□□ 0.62
Trank1Q8BV79 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trank1Q8BV79 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC18.9■□□□□ 0.62
Trank1Q8BV79 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trank1Q8BV79 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trank1Q8BV79 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trank1Q8BV79 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trank1Q8BV79 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trank1Q8BV79 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trank1Q8BV79 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trank1Q8BV79 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Trank1Q8BV79 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trank1Q8BV79 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trank1Q8BV79 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Trank1Q8BV79 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC18.88■□□□□ 0.61
Trank1Q8BV79 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trank1Q8BV79 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC18.87■□□□□ 0.61
Trank1Q8BV79 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Trank1Q8BV79 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trank1Q8BV79 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC18.87■□□□□ 0.61
Trank1Q8BV79 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Trank1Q8BV79 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Trank1Q8BV79 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
Trank1Q8BV79 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC18.87■□□□□ 0.61
Trank1Q8BV79 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trank1Q8BV79 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Trank1Q8BV79 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Trank1Q8BV79 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Trank1Q8BV79 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trank1Q8BV79 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 9.6 ms