Protein–RNA interactions for Protein: Q8BUV6

Lsm11, U7 snRNA-associated Sm-like protein LSm11, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm11Q8BUV6 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Lsm11Q8BUV6 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Lsm11Q8BUV6 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Lsm11Q8BUV6 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Lsm11Q8BUV6 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Lsm11Q8BUV6 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Lsm11Q8BUV6 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Lsm11Q8BUV6 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lsm11Q8BUV6 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lsm11Q8BUV6 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Lsm11Q8BUV6 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lsm11Q8BUV6 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Lsm11Q8BUV6 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Lsm11Q8BUV6 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Lsm11Q8BUV6 Hsf1-207ENSMUST00000228371 2102 ntBASIC18.2■□□□□ 0.5
Lsm11Q8BUV6 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Lsm11Q8BUV6 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Lsm11Q8BUV6 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Lsm11Q8BUV6 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Lsm11Q8BUV6 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Lsm11Q8BUV6 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Lsm11Q8BUV6 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Lsm11Q8BUV6 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Lsm11Q8BUV6 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Lsm11Q8BUV6 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lsm11Q8BUV6 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lsm11Q8BUV6 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lsm11Q8BUV6 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lsm11Q8BUV6 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lsm11Q8BUV6 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lsm11Q8BUV6 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lsm11Q8BUV6 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lsm11Q8BUV6 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC18.17■□□□□ 0.5
Lsm11Q8BUV6 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lsm11Q8BUV6 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Lsm11Q8BUV6 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC18.17■□□□□ 0.5
Lsm11Q8BUV6 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lsm11Q8BUV6 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lsm11Q8BUV6 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC18.16■□□□□ 0.5
Lsm11Q8BUV6 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC18.15■□□□□ 0.5
Lsm11Q8BUV6 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Lsm11Q8BUV6 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Lsm11Q8BUV6 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lsm11Q8BUV6 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Lsm11Q8BUV6 Notumos-201ENSMUST00000151998 2659 ntBASIC18.15■□□□□ 0.5
Lsm11Q8BUV6 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Lsm11Q8BUV6 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Lsm11Q8BUV6 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC18.14■□□□□ 0.49
Lsm11Q8BUV6 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC18.14■□□□□ 0.49
Lsm11Q8BUV6 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Lsm11Q8BUV6 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC18.14■□□□□ 0.49
Lsm11Q8BUV6 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Lsm11Q8BUV6 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC18.14■□□□□ 0.49
Lsm11Q8BUV6 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lsm11Q8BUV6 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lsm11Q8BUV6 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lsm11Q8BUV6 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lsm11Q8BUV6 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lsm11Q8BUV6 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lsm11Q8BUV6 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
Lsm11Q8BUV6 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lsm11Q8BUV6 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Lsm11Q8BUV6 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lsm11Q8BUV6 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lsm11Q8BUV6 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lsm11Q8BUV6 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lsm11Q8BUV6 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
Lsm11Q8BUV6 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lsm11Q8BUV6 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC18.12■□□□□ 0.49
Lsm11Q8BUV6 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Lsm11Q8BUV6 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Lsm11Q8BUV6 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Lsm11Q8BUV6 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Lsm11Q8BUV6 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Lsm11Q8BUV6 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Lsm11Q8BUV6 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Lsm11Q8BUV6 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Lsm11Q8BUV6 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Lsm11Q8BUV6 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Lsm11Q8BUV6 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Lsm11Q8BUV6 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Lsm11Q8BUV6 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Lsm11Q8BUV6 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC18.11■□□□□ 0.49
Lsm11Q8BUV6 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC18.1■□□□□ 0.49
Lsm11Q8BUV6 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Lsm11Q8BUV6 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Lsm11Q8BUV6 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC18.1■□□□□ 0.49
Lsm11Q8BUV6 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Lsm11Q8BUV6 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Lsm11Q8BUV6 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Lsm11Q8BUV6 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC18.09■□□□□ 0.49
Lsm11Q8BUV6 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Lsm11Q8BUV6 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Lsm11Q8BUV6 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC18.09■□□□□ 0.49
Lsm11Q8BUV6 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Lsm11Q8BUV6 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Lsm11Q8BUV6 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Lsm11Q8BUV6 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Lsm11Q8BUV6 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Lsm11Q8BUV6 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC18.08■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 86.5 ms