Protein–RNA interactions for Protein: Q8BR65

Suds3, Sin3 histone deacetylase corepressor complex component SDS3, mousemouse

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Suds3Q8BR65 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Suds3Q8BR65 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Suds3Q8BR65 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
Suds3Q8BR65 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Suds3Q8BR65 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Suds3Q8BR65 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Suds3Q8BR65 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
Suds3Q8BR65 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
Suds3Q8BR65 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Suds3Q8BR65 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
Suds3Q8BR65 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC21.83■■□□□ 1.08
Suds3Q8BR65 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Suds3Q8BR65 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC21.82■■□□□ 1.08
Suds3Q8BR65 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC21.82■■□□□ 1.08
Suds3Q8BR65 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Suds3Q8BR65 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
Suds3Q8BR65 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Suds3Q8BR65 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Suds3Q8BR65 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Suds3Q8BR65 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Suds3Q8BR65 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Suds3Q8BR65 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Suds3Q8BR65 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Suds3Q8BR65 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC21.8■■□□□ 1.08
Suds3Q8BR65 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Suds3Q8BR65 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Suds3Q8BR65 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Suds3Q8BR65 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Suds3Q8BR65 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
Suds3Q8BR65 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Suds3Q8BR65 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
Suds3Q8BR65 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC21.79■■□□□ 1.08
Suds3Q8BR65 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC21.79■■□□□ 1.08
Suds3Q8BR65 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Suds3Q8BR65 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Suds3Q8BR65 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Suds3Q8BR65 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
Suds3Q8BR65 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Suds3Q8BR65 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Suds3Q8BR65 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Suds3Q8BR65 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
Suds3Q8BR65 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Suds3Q8BR65 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Suds3Q8BR65 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Suds3Q8BR65 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Suds3Q8BR65 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Suds3Q8BR65 AC117245.4-201ENSMUST00000217388 1646 ntBASIC21.76■■□□□ 1.07
Suds3Q8BR65 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Suds3Q8BR65 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Suds3Q8BR65 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Suds3Q8BR65 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Suds3Q8BR65 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
Suds3Q8BR65 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Suds3Q8BR65 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Suds3Q8BR65 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC21.75■■□□□ 1.07
Suds3Q8BR65 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Suds3Q8BR65 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
Suds3Q8BR65 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Suds3Q8BR65 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Suds3Q8BR65 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Suds3Q8BR65 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Suds3Q8BR65 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
Suds3Q8BR65 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Suds3Q8BR65 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Suds3Q8BR65 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Suds3Q8BR65 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
Suds3Q8BR65 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Suds3Q8BR65 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Suds3Q8BR65 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Suds3Q8BR65 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Suds3Q8BR65 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Suds3Q8BR65 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Suds3Q8BR65 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
Suds3Q8BR65 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
Suds3Q8BR65 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Suds3Q8BR65 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Suds3Q8BR65 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Suds3Q8BR65 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Suds3Q8BR65 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Suds3Q8BR65 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Suds3Q8BR65 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Suds3Q8BR65 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Suds3Q8BR65 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Suds3Q8BR65 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Suds3Q8BR65 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC21.69■■□□□ 1.06
Suds3Q8BR65 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC21.69■■□□□ 1.06
Suds3Q8BR65 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Suds3Q8BR65 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Suds3Q8BR65 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Suds3Q8BR65 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Suds3Q8BR65 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Suds3Q8BR65 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Suds3Q8BR65 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Suds3Q8BR65 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Suds3Q8BR65 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
Suds3Q8BR65 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC21.66■■□□□ 1.06
Suds3Q8BR65 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Suds3Q8BR65 Notumos-201ENSMUST00000151998 2659 ntBASIC21.66■■□□□ 1.06
Suds3Q8BR65 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Suds3Q8BR65 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms