Protein–RNA interactions for Protein: Q8BMK4

Ckap4, Cytoskeleton-associated protein 4, mousemouse

Known RBP Predictions only

Length 575 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4Q8BMK4 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Ckap4Q8BMK4 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ckap4Q8BMK4 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Ckap4Q8BMK4 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ckap4Q8BMK4 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Ckap4Q8BMK4 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ckap4Q8BMK4 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Ckap4Q8BMK4 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ckap4Q8BMK4 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC20.18■□□□□ 0.82
Ckap4Q8BMK4 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ckap4Q8BMK4 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ckap4Q8BMK4 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.18■□□□□ 0.82
Ckap4Q8BMK4 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ckap4Q8BMK4 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.17■□□□□ 0.82
Ckap4Q8BMK4 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ckap4Q8BMK4 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ckap4Q8BMK4 Gm44428-201ENSMUST00000204474 874 ntBASIC20.17■□□□□ 0.82
Ckap4Q8BMK4 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ckap4Q8BMK4 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ckap4Q8BMK4 Gm7199-201ENSMUST00000118327 1485 ntBASIC20.17■□□□□ 0.82
Ckap4Q8BMK4 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ckap4Q8BMK4 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ckap4Q8BMK4 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Ckap4Q8BMK4 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ckap4Q8BMK4 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ckap4Q8BMK4 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20.16■□□□□ 0.82
Ckap4Q8BMK4 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ckap4Q8BMK4 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Ckap4Q8BMK4 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ckap4Q8BMK4 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Ckap4Q8BMK4 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.15■□□□□ 0.82
Ckap4Q8BMK4 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ckap4Q8BMK4 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
Ckap4Q8BMK4 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.14■□□□□ 0.81
Ckap4Q8BMK4 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ckap4Q8BMK4 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Ckap4Q8BMK4 AC153524.1-201ENSMUST00000220436 1935 ntBASIC20.13■□□□□ 0.81
Ckap4Q8BMK4 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Ckap4Q8BMK4 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Ckap4Q8BMK4 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ckap4Q8BMK4 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC20.12■□□□□ 0.81
Ckap4Q8BMK4 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Ckap4Q8BMK4 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Ckap4Q8BMK4 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ckap4Q8BMK4 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ckap4Q8BMK4 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ckap4Q8BMK4 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ckap4Q8BMK4 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ckap4Q8BMK4 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ckap4Q8BMK4 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC20.11■□□□□ 0.81
Ckap4Q8BMK4 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Ckap4Q8BMK4 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC20.11■□□□□ 0.81
Ckap4Q8BMK4 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Ckap4Q8BMK4 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ckap4Q8BMK4 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Ckap4Q8BMK4 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ckap4Q8BMK4 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Ckap4Q8BMK4 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ckap4Q8BMK4 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
Ckap4Q8BMK4 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Ckap4Q8BMK4 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ckap4Q8BMK4 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ckap4Q8BMK4 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ckap4Q8BMK4 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Ckap4Q8BMK4 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ckap4Q8BMK4 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ckap4Q8BMK4 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ckap4Q8BMK4 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Ckap4Q8BMK4 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Ckap4Q8BMK4 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Ckap4Q8BMK4 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Ckap4Q8BMK4 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Ckap4Q8BMK4 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ckap4Q8BMK4 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ckap4Q8BMK4 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Ckap4Q8BMK4 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Ckap4Q8BMK4 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC20.07■□□□□ 0.8
Ckap4Q8BMK4 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ckap4Q8BMK4 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ckap4Q8BMK4 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Ckap4Q8BMK4 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ckap4Q8BMK4 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC20.06■□□□□ 0.8
Ckap4Q8BMK4 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ckap4Q8BMK4 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Ckap4Q8BMK4 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Ckap4Q8BMK4 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ckap4Q8BMK4 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.06■□□□□ 0.8
Ckap4Q8BMK4 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ckap4Q8BMK4 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.06■□□□□ 0.8
Ckap4Q8BMK4 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ckap4Q8BMK4 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.04■□□□□ 0.8
Ckap4Q8BMK4 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ckap4Q8BMK4 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.04■□□□□ 0.8
Ckap4Q8BMK4 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Ckap4Q8BMK4 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ckap4Q8BMK4 Mir6538-201ENSMUST00000183713 110 ntBASIC20.04■□□□□ 0.8
Ckap4Q8BMK4 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC20.04■□□□□ 0.8
Ckap4Q8BMK4 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.04■□□□□ 0.8
Ckap4Q8BMK4 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC20.04■□□□□ 0.8
Ckap4Q8BMK4 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 111.7 ms