Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Gm8093-201ENSMUST00000128935 1892 ntBASIC29.02■■■□□ 2.24
Col16a1Q8BLX7 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
Col16a1Q8BLX7 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC29.01■■■□□ 2.24
Col16a1Q8BLX7 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC29.01■■■□□ 2.24
Col16a1Q8BLX7 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
Col16a1Q8BLX7 Golgb1-201ENSMUST00000023534 498 ntBASIC29.01■■■□□ 2.23
Col16a1Q8BLX7 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
Col16a1Q8BLX7 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
Col16a1Q8BLX7 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
Col16a1Q8BLX7 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC28.99■■■□□ 2.23
Col16a1Q8BLX7 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
Col16a1Q8BLX7 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC28.99■■■□□ 2.23
Col16a1Q8BLX7 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC28.98■■■□□ 2.23
Col16a1Q8BLX7 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC28.98■■■□□ 2.23
Col16a1Q8BLX7 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC28.97■■■□□ 2.23
Col16a1Q8BLX7 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
Col16a1Q8BLX7 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
Col16a1Q8BLX7 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
Col16a1Q8BLX7 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC28.97■■■□□ 2.23
Col16a1Q8BLX7 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
Col16a1Q8BLX7 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
Col16a1Q8BLX7 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC28.97■■■□□ 2.23
Col16a1Q8BLX7 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC28.96■■■□□ 2.23
Col16a1Q8BLX7 Gm5297-201ENSMUST00000198555 1171 ntBASIC28.96■■■□□ 2.23
Col16a1Q8BLX7 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
Col16a1Q8BLX7 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC28.96■■■□□ 2.23
Col16a1Q8BLX7 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
Col16a1Q8BLX7 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC28.96■■■□□ 2.23
Col16a1Q8BLX7 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC28.96■■■□□ 2.23
Col16a1Q8BLX7 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC28.96■■■□□ 2.23
Col16a1Q8BLX7 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
Col16a1Q8BLX7 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
Col16a1Q8BLX7 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC28.95■■■□□ 2.23
Col16a1Q8BLX7 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC28.95■■■□□ 2.22
Col16a1Q8BLX7 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC28.94■■■□□ 2.22
Col16a1Q8BLX7 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
Col16a1Q8BLX7 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
Col16a1Q8BLX7 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC28.94■■■□□ 2.22
Col16a1Q8BLX7 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC28.93■■■□□ 2.22
Col16a1Q8BLX7 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC28.93■■■□□ 2.22
Col16a1Q8BLX7 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
Col16a1Q8BLX7 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC28.93■■■□□ 2.22
Col16a1Q8BLX7 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
Col16a1Q8BLX7 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC28.93■■■□□ 2.22
Col16a1Q8BLX7 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC28.93■■■□□ 2.22
Col16a1Q8BLX7 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
Col16a1Q8BLX7 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC28.92■■■□□ 2.22
Col16a1Q8BLX7 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
Col16a1Q8BLX7 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC28.91■■■□□ 2.22
Col16a1Q8BLX7 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
Col16a1Q8BLX7 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC28.91■■■□□ 2.22
Col16a1Q8BLX7 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC28.91■■■□□ 2.22
Col16a1Q8BLX7 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
Col16a1Q8BLX7 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC28.9■■■□□ 2.22
Col16a1Q8BLX7 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC28.9■■■□□ 2.22
Col16a1Q8BLX7 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
Col16a1Q8BLX7 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
Col16a1Q8BLX7 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC28.89■■■□□ 2.22
Col16a1Q8BLX7 Slc35b2-207ENSMUST00000226086 850 ntBASIC28.89■■■□□ 2.22
Col16a1Q8BLX7 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC28.89■■■□□ 2.22
Col16a1Q8BLX7 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC28.88■■■□□ 2.21
Col16a1Q8BLX7 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC28.88■■■□□ 2.21
Col16a1Q8BLX7 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC28.88■■■□□ 2.21
Col16a1Q8BLX7 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
Col16a1Q8BLX7 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC28.88■■■□□ 2.21
Col16a1Q8BLX7 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
Col16a1Q8BLX7 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC28.87■■■□□ 2.21
Col16a1Q8BLX7 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC28.87■■■□□ 2.21
Col16a1Q8BLX7 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
Col16a1Q8BLX7 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
Col16a1Q8BLX7 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
Col16a1Q8BLX7 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC28.86■■■□□ 2.21
Col16a1Q8BLX7 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
Col16a1Q8BLX7 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
Col16a1Q8BLX7 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
Col16a1Q8BLX7 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC28.86■■■□□ 2.21
Col16a1Q8BLX7 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC28.86■■■□□ 2.21
Col16a1Q8BLX7 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
Col16a1Q8BLX7 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
Col16a1Q8BLX7 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
Col16a1Q8BLX7 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC28.85■■■□□ 2.21
Col16a1Q8BLX7 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC28.84■■■□□ 2.21
Col16a1Q8BLX7 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC28.84■■■□□ 2.21
Col16a1Q8BLX7 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
Col16a1Q8BLX7 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
Col16a1Q8BLX7 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC28.83■■■□□ 2.21
Col16a1Q8BLX7 Gm6934-201ENSMUST00000194780 1905 ntBASIC28.83■■■□□ 2.21
Col16a1Q8BLX7 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
Col16a1Q8BLX7 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC28.82■■■□□ 2.2
Col16a1Q8BLX7 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
Col16a1Q8BLX7 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
Col16a1Q8BLX7 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
Col16a1Q8BLX7 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC28.82■■■□□ 2.2
Col16a1Q8BLX7 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
Col16a1Q8BLX7 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
Col16a1Q8BLX7 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
Col16a1Q8BLX7 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC28.81■■■□□ 2.2
Col16a1Q8BLX7 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
Col16a1Q8BLX7 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC28.8■■■□□ 2.2
Col16a1Q8BLX7 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
Retrieved 100 of 76,532 protein–RNA pairs in 166.9 ms