Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Smg1Q8BKX6 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC18.59■□□□□ 0.57
Smg1Q8BKX6 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Smg1Q8BKX6 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Smg1Q8BKX6 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Smg1Q8BKX6 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Smg1Q8BKX6 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Smg1Q8BKX6 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Smg1Q8BKX6 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Smg1Q8BKX6 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC18.58■□□□□ 0.56
Smg1Q8BKX6 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC18.58■□□□□ 0.56
Smg1Q8BKX6 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Smg1Q8BKX6 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Smg1Q8BKX6 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Smg1Q8BKX6 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Smg1Q8BKX6 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC18.57■□□□□ 0.56
Smg1Q8BKX6 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Smg1Q8BKX6 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC18.57■□□□□ 0.56
Smg1Q8BKX6 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Smg1Q8BKX6 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC18.56■□□□□ 0.56
Smg1Q8BKX6 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Smg1Q8BKX6 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Smg1Q8BKX6 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Smg1Q8BKX6 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Smg1Q8BKX6 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Smg1Q8BKX6 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
Smg1Q8BKX6 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Smg1Q8BKX6 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Smg1Q8BKX6 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC18.55■□□□□ 0.56
Smg1Q8BKX6 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Smg1Q8BKX6 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Smg1Q8BKX6 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Smg1Q8BKX6 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC18.55■□□□□ 0.56
Smg1Q8BKX6 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC18.55■□□□□ 0.56
Smg1Q8BKX6 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Smg1Q8BKX6 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Smg1Q8BKX6 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Smg1Q8BKX6 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Smg1Q8BKX6 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC18.54■□□□□ 0.56
Smg1Q8BKX6 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Smg1Q8BKX6 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Smg1Q8BKX6 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC18.54■□□□□ 0.56
Smg1Q8BKX6 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC18.54■□□□□ 0.56
Smg1Q8BKX6 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Smg1Q8BKX6 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smg1Q8BKX6 Gm26571-201ENSMUST00000181399 666 ntBASIC18.53■□□□□ 0.56
Smg1Q8BKX6 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smg1Q8BKX6 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Smg1Q8BKX6 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Smg1Q8BKX6 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC18.52■□□□□ 0.56
Smg1Q8BKX6 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.55
Smg1Q8BKX6 Gm7291-201ENSMUST00000199147 382 ntBASIC18.52■□□□□ 0.55
Smg1Q8BKX6 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Smg1Q8BKX6 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Smg1Q8BKX6 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smg1Q8BKX6 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC18.51■□□□□ 0.55
Smg1Q8BKX6 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC18.51■□□□□ 0.55
Smg1Q8BKX6 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC18.51■□□□□ 0.55
Smg1Q8BKX6 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC18.51■□□□□ 0.55
Smg1Q8BKX6 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smg1Q8BKX6 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Smg1Q8BKX6 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smg1Q8BKX6 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC18.51■□□□□ 0.55
Smg1Q8BKX6 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smg1Q8BKX6 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smg1Q8BKX6 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smg1Q8BKX6 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smg1Q8BKX6 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smg1Q8BKX6 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smg1Q8BKX6 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Smg1Q8BKX6 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Smg1Q8BKX6 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smg1Q8BKX6 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
Smg1Q8BKX6 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
Smg1Q8BKX6 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC18.5■□□□□ 0.55
Smg1Q8BKX6 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC18.5■□□□□ 0.55
Smg1Q8BKX6 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Smg1Q8BKX6 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smg1Q8BKX6 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC18.49■□□□□ 0.55
Smg1Q8BKX6 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smg1Q8BKX6 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smg1Q8BKX6 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC18.48■□□□□ 0.55
Smg1Q8BKX6 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Smg1Q8BKX6 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC18.48■□□□□ 0.55
Smg1Q8BKX6 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC18.48■□□□□ 0.55
Smg1Q8BKX6 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Smg1Q8BKX6 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Smg1Q8BKX6 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC18.47■□□□□ 0.55
Smg1Q8BKX6 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Smg1Q8BKX6 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Smg1Q8BKX6 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Smg1Q8BKX6 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
Smg1Q8BKX6 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC18.46■□□□□ 0.55
Smg1Q8BKX6 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Smg1Q8BKX6 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Smg1Q8BKX6 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Smg1Q8BKX6 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Smg1Q8BKX6 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Smg1Q8BKX6 AC153524.1-201ENSMUST00000220436 1935 ntBASIC18.45■□□□□ 0.54
Smg1Q8BKX6 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms