Protein–RNA interactions for Protein: Q8BKD6

Rnf144b, E3 ubiquitin-protein ligase RNF144B, mousemouse

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf144bQ8BKD6 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC18.24■□□□□ 0.51
Rnf144bQ8BKD6 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Rnf144bQ8BKD6 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC18.24■□□□□ 0.51
Rnf144bQ8BKD6 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Rnf144bQ8BKD6 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rnf144bQ8BKD6 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC18.23■□□□□ 0.51
Rnf144bQ8BKD6 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rnf144bQ8BKD6 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Rnf144bQ8BKD6 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rnf144bQ8BKD6 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Rnf144bQ8BKD6 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC18.22■□□□□ 0.51
Rnf144bQ8BKD6 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rnf144bQ8BKD6 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rnf144bQ8BKD6 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rnf144bQ8BKD6 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Rnf144bQ8BKD6 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rnf144bQ8BKD6 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC18.22■□□□□ 0.51
Rnf144bQ8BKD6 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rnf144bQ8BKD6 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Rnf144bQ8BKD6 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rnf144bQ8BKD6 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Rnf144bQ8BKD6 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rnf144bQ8BKD6 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rnf144bQ8BKD6 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rnf144bQ8BKD6 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
Rnf144bQ8BKD6 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC18.2■□□□□ 0.5
Rnf144bQ8BKD6 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rnf144bQ8BKD6 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rnf144bQ8BKD6 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rnf144bQ8BKD6 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rnf144bQ8BKD6 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Rnf144bQ8BKD6 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rnf144bQ8BKD6 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Rnf144bQ8BKD6 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Rnf144bQ8BKD6 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rnf144bQ8BKD6 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Rnf144bQ8BKD6 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rnf144bQ8BKD6 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rnf144bQ8BKD6 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Rnf144bQ8BKD6 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rnf144bQ8BKD6 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC18.18■□□□□ 0.5
Rnf144bQ8BKD6 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rnf144bQ8BKD6 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC18.18■□□□□ 0.5
Rnf144bQ8BKD6 Gm12504-201ENSMUST00000120860 2231 ntBASIC18.18■□□□□ 0.5
Rnf144bQ8BKD6 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Rnf144bQ8BKD6 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rnf144bQ8BKD6 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Rnf144bQ8BKD6 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Rnf144bQ8BKD6 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rnf144bQ8BKD6 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rnf144bQ8BKD6 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rnf144bQ8BKD6 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rnf144bQ8BKD6 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rnf144bQ8BKD6 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rnf144bQ8BKD6 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rnf144bQ8BKD6 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rnf144bQ8BKD6 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rnf144bQ8BKD6 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Rnf144bQ8BKD6 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Rnf144bQ8BKD6 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rnf144bQ8BKD6 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rnf144bQ8BKD6 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rnf144bQ8BKD6 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Rnf144bQ8BKD6 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rnf144bQ8BKD6 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rnf144bQ8BKD6 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rnf144bQ8BKD6 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rnf144bQ8BKD6 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Rnf144bQ8BKD6 Gm14523-201ENSMUST00000117260 558 ntBASIC18.16■□□□□ 0.5
Rnf144bQ8BKD6 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Rnf144bQ8BKD6 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rnf144bQ8BKD6 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rnf144bQ8BKD6 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rnf144bQ8BKD6 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rnf144bQ8BKD6 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rnf144bQ8BKD6 Gm42418-201ENSMUST00000182010 1831 ntBASIC18.16■□□□□ 0.5
Rnf144bQ8BKD6 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rnf144bQ8BKD6 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rnf144bQ8BKD6 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Rnf144bQ8BKD6 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf144bQ8BKD6 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf144bQ8BKD6 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC18.15■□□□□ 0.5
Rnf144bQ8BKD6 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf144bQ8BKD6 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
Rnf144bQ8BKD6 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Rnf144bQ8BKD6 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf144bQ8BKD6 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
Rnf144bQ8BKD6 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf144bQ8BKD6 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC18.14■□□□□ 0.5
Rnf144bQ8BKD6 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC18.14■□□□□ 0.5
Rnf144bQ8BKD6 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Rnf144bQ8BKD6 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Rnf144bQ8BKD6 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Rnf144bQ8BKD6 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Rnf144bQ8BKD6 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Rnf144bQ8BKD6 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rnf144bQ8BKD6 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC18.14■□□□□ 0.49
Rnf144bQ8BKD6 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Rnf144bQ8BKD6 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rnf144bQ8BKD6 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 10.2 ms