Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
Chmp2bQ8BJF9 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC21.87■■□□□ 1.09
Chmp2bQ8BJF9 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Chmp2bQ8BJF9 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Chmp2bQ8BJF9 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Chmp2bQ8BJF9 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Chmp2bQ8BJF9 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Chmp2bQ8BJF9 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Chmp2bQ8BJF9 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
Chmp2bQ8BJF9 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Chmp2bQ8BJF9 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Chmp2bQ8BJF9 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
Chmp2bQ8BJF9 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Chmp2bQ8BJF9 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Chmp2bQ8BJF9 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Chmp2bQ8BJF9 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Chmp2bQ8BJF9 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Chmp2bQ8BJF9 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Chmp2bQ8BJF9 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
Chmp2bQ8BJF9 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC21.84■■□□□ 1.09
Chmp2bQ8BJF9 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC21.84■■□□□ 1.09
Chmp2bQ8BJF9 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Chmp2bQ8BJF9 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC21.84■■□□□ 1.09
Chmp2bQ8BJF9 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
Chmp2bQ8BJF9 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Chmp2bQ8BJF9 Scarna2-201ENSMUST00000157560 414 ntBASIC21.83■■□□□ 1.09
Chmp2bQ8BJF9 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC21.83■■□□□ 1.09
Chmp2bQ8BJF9 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Chmp2bQ8BJF9 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
Chmp2bQ8BJF9 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
Chmp2bQ8BJF9 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
Chmp2bQ8BJF9 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
Chmp2bQ8BJF9 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Chmp2bQ8BJF9 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC21.82■■□□□ 1.08
Chmp2bQ8BJF9 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC21.82■■□□□ 1.08
Chmp2bQ8BJF9 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
Chmp2bQ8BJF9 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Chmp2bQ8BJF9 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC21.81■■□□□ 1.08
Chmp2bQ8BJF9 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
Chmp2bQ8BJF9 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC21.81■■□□□ 1.08
Chmp2bQ8BJF9 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC21.81■■□□□ 1.08
Chmp2bQ8BJF9 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Chmp2bQ8BJF9 AC117769.4-201ENSMUST00000225679 685 ntBASIC21.81■■□□□ 1.08
Chmp2bQ8BJF9 Gm16437-201ENSMUST00000025669 507 ntBASIC21.81■■□□□ 1.08
Chmp2bQ8BJF9 Gm9806-201ENSMUST00000051080 552 ntBASIC21.81■■□□□ 1.08
Chmp2bQ8BJF9 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC21.81■■□□□ 1.08
Chmp2bQ8BJF9 Gm37415-201ENSMUST00000192265 2054 ntBASIC21.81■■□□□ 1.08
Chmp2bQ8BJF9 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Chmp2bQ8BJF9 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Chmp2bQ8BJF9 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC21.79■■□□□ 1.08
Chmp2bQ8BJF9 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Chmp2bQ8BJF9 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Chmp2bQ8BJF9 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
Chmp2bQ8BJF9 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Chmp2bQ8BJF9 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Chmp2bQ8BJF9 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
Chmp2bQ8BJF9 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Chmp2bQ8BJF9 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Chmp2bQ8BJF9 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC21.78■■□□□ 1.08
Chmp2bQ8BJF9 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC21.78■■□□□ 1.08
Chmp2bQ8BJF9 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC21.78■■□□□ 1.08
Chmp2bQ8BJF9 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Chmp2bQ8BJF9 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
Chmp2bQ8BJF9 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
Chmp2bQ8BJF9 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Chmp2bQ8BJF9 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Chmp2bQ8BJF9 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Chmp2bQ8BJF9 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Chmp2bQ8BJF9 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC21.77■■□□□ 1.08
Chmp2bQ8BJF9 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Chmp2bQ8BJF9 Gm12504-201ENSMUST00000120860 2231 ntBASIC21.77■■□□□ 1.08
Chmp2bQ8BJF9 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Chmp2bQ8BJF9 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC21.76■■□□□ 1.07
Chmp2bQ8BJF9 AC151971.4-201ENSMUST00000214717 704 ntBASIC21.76■■□□□ 1.07
Chmp2bQ8BJF9 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Chmp2bQ8BJF9 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Chmp2bQ8BJF9 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Chmp2bQ8BJF9 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Chmp2bQ8BJF9 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Chmp2bQ8BJF9 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Chmp2bQ8BJF9 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Chmp2bQ8BJF9 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Chmp2bQ8BJF9 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
Chmp2bQ8BJF9 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Chmp2bQ8BJF9 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Chmp2bQ8BJF9 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Chmp2bQ8BJF9 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Chmp2bQ8BJF9 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Chmp2bQ8BJF9 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Chmp2bQ8BJF9 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Chmp2bQ8BJF9 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Chmp2bQ8BJF9 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Chmp2bQ8BJF9 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Chmp2bQ8BJF9 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Chmp2bQ8BJF9 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC21.73■■□□□ 1.07
Chmp2bQ8BJF9 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Chmp2bQ8BJF9 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
Chmp2bQ8BJF9 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC21.73■■□□□ 1.07
Chmp2bQ8BJF9 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Chmp2bQ8BJF9 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms