Protein–RNA interactions for Protein: Q8BI41

Synb, Syncytin-B, mousemouse

Predictions only

Length 618 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynbQ8BI41 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SynbQ8BI41 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
SynbQ8BI41 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SynbQ8BI41 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SynbQ8BI41 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.31■□□□□ 0.84
SynbQ8BI41 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SynbQ8BI41 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC20.31■□□□□ 0.84
SynbQ8BI41 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SynbQ8BI41 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SynbQ8BI41 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SynbQ8BI41 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SynbQ8BI41 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SynbQ8BI41 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
SynbQ8BI41 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
SynbQ8BI41 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
SynbQ8BI41 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SynbQ8BI41 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SynbQ8BI41 AC164433.2-201ENSMUST00000226346 1701 ntBASIC20.3■□□□□ 0.84
SynbQ8BI41 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SynbQ8BI41 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SynbQ8BI41 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SynbQ8BI41 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SynbQ8BI41 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC20.29■□□□□ 0.84
SynbQ8BI41 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.29■□□□□ 0.84
SynbQ8BI41 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
SynbQ8BI41 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SynbQ8BI41 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SynbQ8BI41 Notumos-201ENSMUST00000151998 2659 ntBASIC20.28■□□□□ 0.84
SynbQ8BI41 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
SynbQ8BI41 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC20.28■□□□□ 0.84
SynbQ8BI41 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SynbQ8BI41 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SynbQ8BI41 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
SynbQ8BI41 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SynbQ8BI41 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
SynbQ8BI41 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
SynbQ8BI41 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
SynbQ8BI41 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC20.27■□□□□ 0.84
SynbQ8BI41 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.27■□□□□ 0.84
SynbQ8BI41 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SynbQ8BI41 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SynbQ8BI41 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SynbQ8BI41 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SynbQ8BI41 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SynbQ8BI41 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SynbQ8BI41 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SynbQ8BI41 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC20.26■□□□□ 0.83
SynbQ8BI41 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SynbQ8BI41 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
SynbQ8BI41 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SynbQ8BI41 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
SynbQ8BI41 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SynbQ8BI41 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC20.25■□□□□ 0.83
SynbQ8BI41 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SynbQ8BI41 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SynbQ8BI41 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SynbQ8BI41 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SynbQ8BI41 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
SynbQ8BI41 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SynbQ8BI41 Gm16464-201ENSMUST00000117815 1095 ntBASIC20.24■□□□□ 0.83
SynbQ8BI41 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC20.24■□□□□ 0.83
SynbQ8BI41 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC20.24■□□□□ 0.83
SynbQ8BI41 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SynbQ8BI41 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SynbQ8BI41 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SynbQ8BI41 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SynbQ8BI41 Dmtn-209ENSMUST00000228295 2572 ntBASIC20.24■□□□□ 0.83
SynbQ8BI41 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SynbQ8BI41 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SynbQ8BI41 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SynbQ8BI41 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SynbQ8BI41 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SynbQ8BI41 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SynbQ8BI41 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.23■□□□□ 0.83
SynbQ8BI41 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SynbQ8BI41 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
SynbQ8BI41 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SynbQ8BI41 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SynbQ8BI41 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SynbQ8BI41 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC20.23■□□□□ 0.83
SynbQ8BI41 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SynbQ8BI41 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SynbQ8BI41 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC20.22■□□□□ 0.83
SynbQ8BI41 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SynbQ8BI41 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SynbQ8BI41 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC20.21■□□□□ 0.83
SynbQ8BI41 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC20.21■□□□□ 0.83
SynbQ8BI41 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SynbQ8BI41 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SynbQ8BI41 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
SynbQ8BI41 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
SynbQ8BI41 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SynbQ8BI41 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SynbQ8BI41 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20.2■□□□□ 0.83
SynbQ8BI41 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SynbQ8BI41 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SynbQ8BI41 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SynbQ8BI41 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SynbQ8BI41 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SynbQ8BI41 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 13.2 ms