Protein–RNA interactions for Protein: Q8BGX0

Trim23, E3 ubiquitin-protein ligase TRIM23, mousemouse

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23Q8BGX0 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim23Q8BGX0 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Trim23Q8BGX0 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Trim23Q8BGX0 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Trim23Q8BGX0 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Trim23Q8BGX0 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trim23Q8BGX0 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC20.74■□□□□ 0.91
Trim23Q8BGX0 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Trim23Q8BGX0 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC20.73■□□□□ 0.91
Trim23Q8BGX0 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.73■□□□□ 0.91
Trim23Q8BGX0 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Trim23Q8BGX0 Gm5522-201ENSMUST00000189483 1242 ntBASIC20.73■□□□□ 0.91
Trim23Q8BGX0 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC20.73■□□□□ 0.91
Trim23Q8BGX0 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC20.73■□□□□ 0.91
Trim23Q8BGX0 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim23Q8BGX0 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.72■□□□□ 0.91
Trim23Q8BGX0 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Trim23Q8BGX0 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim23Q8BGX0 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.72■□□□□ 0.91
Trim23Q8BGX0 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim23Q8BGX0 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC20.72■□□□□ 0.91
Trim23Q8BGX0 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim23Q8BGX0 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim23Q8BGX0 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Trim23Q8BGX0 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim23Q8BGX0 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Trim23Q8BGX0 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim23Q8BGX0 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim23Q8BGX0 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim23Q8BGX0 Gm16464-201ENSMUST00000117815 1095 ntBASIC20.71■□□□□ 0.91
Trim23Q8BGX0 Gm15546-201ENSMUST00000122095 826 ntBASIC20.71■□□□□ 0.91
Trim23Q8BGX0 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Trim23Q8BGX0 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Trim23Q8BGX0 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Trim23Q8BGX0 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim23Q8BGX0 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Trim23Q8BGX0 Gm28536-201ENSMUST00000190971 1317 ntBASIC20.71■□□□□ 0.91
Trim23Q8BGX0 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Trim23Q8BGX0 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Trim23Q8BGX0 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.91
Trim23Q8BGX0 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Trim23Q8BGX0 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim23Q8BGX0 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim23Q8BGX0 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Trim23Q8BGX0 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
Trim23Q8BGX0 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.69■□□□□ 0.9
Trim23Q8BGX0 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Trim23Q8BGX0 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
Trim23Q8BGX0 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC20.69■□□□□ 0.9
Trim23Q8BGX0 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20.69■□□□□ 0.9
Trim23Q8BGX0 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim23Q8BGX0 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim23Q8BGX0 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim23Q8BGX0 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim23Q8BGX0 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Trim23Q8BGX0 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim23Q8BGX0 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Trim23Q8BGX0 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim23Q8BGX0 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim23Q8BGX0 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Trim23Q8BGX0 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Trim23Q8BGX0 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim23Q8BGX0 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Trim23Q8BGX0 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC20.67■□□□□ 0.9
Trim23Q8BGX0 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Trim23Q8BGX0 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim23Q8BGX0 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Trim23Q8BGX0 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim23Q8BGX0 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim23Q8BGX0 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Trim23Q8BGX0 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim23Q8BGX0 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC20.66■□□□□ 0.9
Trim23Q8BGX0 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim23Q8BGX0 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim23Q8BGX0 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim23Q8BGX0 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim23Q8BGX0 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim23Q8BGX0 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Trim23Q8BGX0 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Trim23Q8BGX0 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Trim23Q8BGX0 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Trim23Q8BGX0 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trim23Q8BGX0 Gm10232-201ENSMUST00000089221 720 ntBASIC20.64■□□□□ 0.89
Trim23Q8BGX0 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trim23Q8BGX0 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trim23Q8BGX0 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC20.63■□□□□ 0.89
Trim23Q8BGX0 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim23Q8BGX0 Gm18755-201ENSMUST00000218030 1099 ntBASIC20.63■□□□□ 0.89
Trim23Q8BGX0 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim23Q8BGX0 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Trim23Q8BGX0 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim23Q8BGX0 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim23Q8BGX0 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim23Q8BGX0 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.62■□□□□ 0.89
Trim23Q8BGX0 Gm11847-201ENSMUST00000125165 1119 ntBASIC20.62■□□□□ 0.89
Trim23Q8BGX0 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC20.62■□□□□ 0.89
Trim23Q8BGX0 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC20.62■□□□□ 0.89
Trim23Q8BGX0 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Trim23Q8BGX0 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim23Q8BGX0 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.61■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms