Protein–RNA interactions for Protein: Q8BFS6

Cpped1, Serine/threonine-protein phosphatase CPPED1, mousemouse

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpped1Q8BFS6 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cpped1Q8BFS6 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC20.96■□□□□ 0.95
Cpped1Q8BFS6 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
Cpped1Q8BFS6 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
Cpped1Q8BFS6 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Cpped1Q8BFS6 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Cpped1Q8BFS6 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.96■□□□□ 0.95
Cpped1Q8BFS6 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Cpped1Q8BFS6 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.95■□□□□ 0.95
Cpped1Q8BFS6 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Cpped1Q8BFS6 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cpped1Q8BFS6 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cpped1Q8BFS6 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Cpped1Q8BFS6 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cpped1Q8BFS6 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.95■□□□□ 0.94
Cpped1Q8BFS6 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cpped1Q8BFS6 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cpped1Q8BFS6 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cpped1Q8BFS6 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Cpped1Q8BFS6 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cpped1Q8BFS6 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cpped1Q8BFS6 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.94■□□□□ 0.94
Cpped1Q8BFS6 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC20.94■□□□□ 0.94
Cpped1Q8BFS6 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cpped1Q8BFS6 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cpped1Q8BFS6 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Cpped1Q8BFS6 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Cpped1Q8BFS6 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cpped1Q8BFS6 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cpped1Q8BFS6 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cpped1Q8BFS6 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cpped1Q8BFS6 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cpped1Q8BFS6 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cpped1Q8BFS6 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cpped1Q8BFS6 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Cpped1Q8BFS6 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cpped1Q8BFS6 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cpped1Q8BFS6 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Cpped1Q8BFS6 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cpped1Q8BFS6 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cpped1Q8BFS6 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC20.91■□□□□ 0.94
Cpped1Q8BFS6 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cpped1Q8BFS6 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cpped1Q8BFS6 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cpped1Q8BFS6 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Cpped1Q8BFS6 Gm5921-201ENSMUST00000075898 882 ntBASIC20.91■□□□□ 0.94
Cpped1Q8BFS6 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.9■□□□□ 0.94
Cpped1Q8BFS6 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cpped1Q8BFS6 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Cpped1Q8BFS6 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cpped1Q8BFS6 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cpped1Q8BFS6 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cpped1Q8BFS6 Dmtn-209ENSMUST00000228295 2572 ntBASIC20.9■□□□□ 0.94
Cpped1Q8BFS6 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cpped1Q8BFS6 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cpped1Q8BFS6 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cpped1Q8BFS6 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Cpped1Q8BFS6 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Cpped1Q8BFS6 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC20.89■□□□□ 0.94
Cpped1Q8BFS6 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cpped1Q8BFS6 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cpped1Q8BFS6 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cpped1Q8BFS6 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cpped1Q8BFS6 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20.89■□□□□ 0.93
Cpped1Q8BFS6 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cpped1Q8BFS6 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.88■□□□□ 0.93
Cpped1Q8BFS6 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC20.88■□□□□ 0.93
Cpped1Q8BFS6 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cpped1Q8BFS6 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Cpped1Q8BFS6 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cpped1Q8BFS6 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Cpped1Q8BFS6 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cpped1Q8BFS6 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cpped1Q8BFS6 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Cpped1Q8BFS6 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cpped1Q8BFS6 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Cpped1Q8BFS6 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cpped1Q8BFS6 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cpped1Q8BFS6 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cpped1Q8BFS6 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Cpped1Q8BFS6 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cpped1Q8BFS6 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cpped1Q8BFS6 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cpped1Q8BFS6 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC20.86■□□□□ 0.93
Cpped1Q8BFS6 Nsd1-203ENSMUST00000224156 1149 ntBASIC20.86■□□□□ 0.93
Cpped1Q8BFS6 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Cpped1Q8BFS6 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cpped1Q8BFS6 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cpped1Q8BFS6 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cpped1Q8BFS6 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Cpped1Q8BFS6 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.86■□□□□ 0.93
Cpped1Q8BFS6 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.86■□□□□ 0.93
Cpped1Q8BFS6 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cpped1Q8BFS6 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cpped1Q8BFS6 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cpped1Q8BFS6 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Cpped1Q8BFS6 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Cpped1Q8BFS6 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC20.85■□□□□ 0.93
Cpped1Q8BFS6 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cpped1Q8BFS6 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 12.2 ms