Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 AC117245.4-201ENSMUST00000217388 1646 ntBASIC18.13■□□□□ 0.49
Upk3bQ80YF6 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Upk3bQ80YF6 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Upk3bQ80YF6 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
Upk3bQ80YF6 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Upk3bQ80YF6 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Upk3bQ80YF6 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC18.13■□□□□ 0.49
Upk3bQ80YF6 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
Upk3bQ80YF6 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Upk3bQ80YF6 Gm37415-201ENSMUST00000192265 2054 ntBASIC18.12■□□□□ 0.49
Upk3bQ80YF6 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Upk3bQ80YF6 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Upk3bQ80YF6 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Upk3bQ80YF6 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Upk3bQ80YF6 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC18.12■□□□□ 0.49
Upk3bQ80YF6 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
Upk3bQ80YF6 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Upk3bQ80YF6 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Upk3bQ80YF6 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Upk3bQ80YF6 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Upk3bQ80YF6 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC18.11■□□□□ 0.49
Upk3bQ80YF6 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC18.11■□□□□ 0.49
Upk3bQ80YF6 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Upk3bQ80YF6 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
Upk3bQ80YF6 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Upk3bQ80YF6 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Upk3bQ80YF6 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Upk3bQ80YF6 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Upk3bQ80YF6 Gm11599-201ENSMUST00000118720 878 ntBASIC18.1■□□□□ 0.49
Upk3bQ80YF6 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC18.1■□□□□ 0.49
Upk3bQ80YF6 Pkd1-207ENSMUST00000228550 1050 ntBASIC18.1■□□□□ 0.49
Upk3bQ80YF6 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Upk3bQ80YF6 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Upk3bQ80YF6 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC18.09■□□□□ 0.49
Upk3bQ80YF6 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Upk3bQ80YF6 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC18.09■□□□□ 0.49
Upk3bQ80YF6 Gm43006-201ENSMUST00000197702 1602 ntBASIC18.09■□□□□ 0.49
Upk3bQ80YF6 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Upk3bQ80YF6 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Upk3bQ80YF6 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Upk3bQ80YF6 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC18.09■□□□□ 0.49
Upk3bQ80YF6 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Upk3bQ80YF6 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Upk3bQ80YF6 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Upk3bQ80YF6 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC18.09■□□□□ 0.49
Upk3bQ80YF6 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.49
Upk3bQ80YF6 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Upk3bQ80YF6 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Upk3bQ80YF6 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Upk3bQ80YF6 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Upk3bQ80YF6 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Upk3bQ80YF6 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Upk3bQ80YF6 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Upk3bQ80YF6 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Upk3bQ80YF6 Gm42418-201ENSMUST00000182010 1831 ntBASIC18.07■□□□□ 0.48
Upk3bQ80YF6 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Upk3bQ80YF6 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Upk3bQ80YF6 Gm12504-201ENSMUST00000120860 2231 ntBASIC18.06■□□□□ 0.48
Upk3bQ80YF6 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Upk3bQ80YF6 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Upk3bQ80YF6 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Upk3bQ80YF6 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Upk3bQ80YF6 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Upk3bQ80YF6 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Upk3bQ80YF6 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Upk3bQ80YF6 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Upk3bQ80YF6 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Upk3bQ80YF6 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Upk3bQ80YF6 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Upk3bQ80YF6 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Upk3bQ80YF6 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Upk3bQ80YF6 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Upk3bQ80YF6 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Upk3bQ80YF6 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Upk3bQ80YF6 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Upk3bQ80YF6 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
Upk3bQ80YF6 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Upk3bQ80YF6 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Upk3bQ80YF6 AC167019.3-201ENSMUST00000228225 1266 ntBASIC18.03■□□□□ 0.48
Upk3bQ80YF6 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Upk3bQ80YF6 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Upk3bQ80YF6 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Upk3bQ80YF6 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC18.02■□□□□ 0.48
Upk3bQ80YF6 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Upk3bQ80YF6 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
Upk3bQ80YF6 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
Upk3bQ80YF6 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Upk3bQ80YF6 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Upk3bQ80YF6 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Upk3bQ80YF6 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Upk3bQ80YF6 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Upk3bQ80YF6 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Upk3bQ80YF6 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Upk3bQ80YF6 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Upk3bQ80YF6 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC18■□□□□ 0.47
Upk3bQ80YF6 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC18■□□□□ 0.47
Upk3bQ80YF6 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC18■□□□□ 0.47
Upk3bQ80YF6 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC18■□□□□ 0.47
Upk3bQ80YF6 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC18■□□□□ 0.47
Upk3bQ80YF6 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms