Protein–RNA interactions for Protein: Q80XJ2

Rnf168, E3 ubiquitin-protein ligase RNF168, mousemouse

Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf168Q80XJ2 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Rnf168Q80XJ2 Gm28731-201ENSMUST00000185564 1569 ntBASIC22.84■■□□□ 1.25
Rnf168Q80XJ2 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC22.84■■□□□ 1.25
Rnf168Q80XJ2 Il17rd-202ENSMUST00000223942 2186 ntBASIC22.83■■□□□ 1.25
Rnf168Q80XJ2 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC22.83■■□□□ 1.25
Rnf168Q80XJ2 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC22.83■■□□□ 1.25
Rnf168Q80XJ2 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Rnf168Q80XJ2 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC22.83■■□□□ 1.25
Rnf168Q80XJ2 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC22.83■■□□□ 1.25
Rnf168Q80XJ2 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC22.83■■□□□ 1.25
Rnf168Q80XJ2 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Rnf168Q80XJ2 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC22.83■■□□□ 1.24
Rnf168Q80XJ2 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Rnf168Q80XJ2 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Rnf168Q80XJ2 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC22.82■■□□□ 1.24
Rnf168Q80XJ2 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Rnf168Q80XJ2 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC22.81■■□□□ 1.24
Rnf168Q80XJ2 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC22.81■■□□□ 1.24
Rnf168Q80XJ2 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
Rnf168Q80XJ2 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Rnf168Q80XJ2 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Rnf168Q80XJ2 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC22.81■■□□□ 1.24
Rnf168Q80XJ2 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Rnf168Q80XJ2 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC22.8■■□□□ 1.24
Rnf168Q80XJ2 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC22.8■■□□□ 1.24
Rnf168Q80XJ2 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC22.8■■□□□ 1.24
Rnf168Q80XJ2 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC22.8■■□□□ 1.24
Rnf168Q80XJ2 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Rnf168Q80XJ2 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Rnf168Q80XJ2 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Rnf168Q80XJ2 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Rnf168Q80XJ2 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Rnf168Q80XJ2 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC22.78■■□□□ 1.24
Rnf168Q80XJ2 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Rnf168Q80XJ2 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Rnf168Q80XJ2 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC22.78■■□□□ 1.24
Rnf168Q80XJ2 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Rnf168Q80XJ2 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC22.78■■□□□ 1.24
Rnf168Q80XJ2 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Rnf168Q80XJ2 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC22.77■■□□□ 1.24
Rnf168Q80XJ2 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Rnf168Q80XJ2 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC22.77■■□□□ 1.24
Rnf168Q80XJ2 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC22.77■■□□□ 1.24
Rnf168Q80XJ2 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Rnf168Q80XJ2 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC22.77■■□□□ 1.24
Rnf168Q80XJ2 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Rnf168Q80XJ2 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC22.77■■□□□ 1.24
Rnf168Q80XJ2 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC22.76■■□□□ 1.23
Rnf168Q80XJ2 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC22.76■■□□□ 1.23
Rnf168Q80XJ2 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Rnf168Q80XJ2 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Rnf168Q80XJ2 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Rnf168Q80XJ2 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Rnf168Q80XJ2 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC22.75■■□□□ 1.23
Rnf168Q80XJ2 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC22.75■■□□□ 1.23
Rnf168Q80XJ2 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Rnf168Q80XJ2 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
Rnf168Q80XJ2 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
Rnf168Q80XJ2 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Rnf168Q80XJ2 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Rnf168Q80XJ2 Gm7417-201ENSMUST00000192950 473 ntBASIC22.74■■□□□ 1.23
Rnf168Q80XJ2 Gm28536-201ENSMUST00000190971 1317 ntBASIC22.74■■□□□ 1.23
Rnf168Q80XJ2 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Rnf168Q80XJ2 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Rnf168Q80XJ2 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Rnf168Q80XJ2 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Rnf168Q80XJ2 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Rnf168Q80XJ2 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Rnf168Q80XJ2 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC22.73■■□□□ 1.23
Rnf168Q80XJ2 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC22.73■■□□□ 1.23
Rnf168Q80XJ2 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC22.73■■□□□ 1.23
Rnf168Q80XJ2 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
Rnf168Q80XJ2 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Rnf168Q80XJ2 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC22.72■■□□□ 1.23
Rnf168Q80XJ2 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Rnf168Q80XJ2 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC22.72■■□□□ 1.23
Rnf168Q80XJ2 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC22.72■■□□□ 1.23
Rnf168Q80XJ2 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Rnf168Q80XJ2 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC22.72■■□□□ 1.23
Rnf168Q80XJ2 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Rnf168Q80XJ2 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC22.72■■□□□ 1.23
Rnf168Q80XJ2 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Rnf168Q80XJ2 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC22.71■■□□□ 1.23
Rnf168Q80XJ2 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC22.71■■□□□ 1.23
Rnf168Q80XJ2 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC22.71■■□□□ 1.23
Rnf168Q80XJ2 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
Rnf168Q80XJ2 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Rnf168Q80XJ2 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC22.7■■□□□ 1.22
Rnf168Q80XJ2 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Rnf168Q80XJ2 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Rnf168Q80XJ2 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Rnf168Q80XJ2 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Rnf168Q80XJ2 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Rnf168Q80XJ2 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Rnf168Q80XJ2 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Rnf168Q80XJ2 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC22.69■■□□□ 1.22
Rnf168Q80XJ2 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Rnf168Q80XJ2 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Rnf168Q80XJ2 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC22.69■■□□□ 1.22
Rnf168Q80XJ2 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms