Protein–RNA interactions for Protein: Q7M6Y2

Sox11, Transcription factor SOX-11, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox11Q7M6Y2 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Sox11Q7M6Y2 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Sox11Q7M6Y2 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Sox11Q7M6Y2 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Sox11Q7M6Y2 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Sox11Q7M6Y2 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC21.78■■□□□ 1.08
Sox11Q7M6Y2 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Sox11Q7M6Y2 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Sox11Q7M6Y2 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
Sox11Q7M6Y2 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Sox11Q7M6Y2 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
Sox11Q7M6Y2 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Sox11Q7M6Y2 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC21.77■■□□□ 1.08
Sox11Q7M6Y2 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Sox11Q7M6Y2 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
Sox11Q7M6Y2 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Sox11Q7M6Y2 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.07
Sox11Q7M6Y2 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Sox11Q7M6Y2 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC21.76■■□□□ 1.07
Sox11Q7M6Y2 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Sox11Q7M6Y2 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Sox11Q7M6Y2 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Sox11Q7M6Y2 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Sox11Q7M6Y2 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Sox11Q7M6Y2 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Sox11Q7M6Y2 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Sox11Q7M6Y2 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC21.75■■□□□ 1.07
Sox11Q7M6Y2 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Sox11Q7M6Y2 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC21.74■■□□□ 1.07
Sox11Q7M6Y2 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Sox11Q7M6Y2 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
Sox11Q7M6Y2 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
Sox11Q7M6Y2 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Sox11Q7M6Y2 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Sox11Q7M6Y2 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Sox11Q7M6Y2 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Sox11Q7M6Y2 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC21.73■■□□□ 1.07
Sox11Q7M6Y2 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Sox11Q7M6Y2 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC21.73■■□□□ 1.07
Sox11Q7M6Y2 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Sox11Q7M6Y2 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Sox11Q7M6Y2 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Sox11Q7M6Y2 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Sox11Q7M6Y2 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Sox11Q7M6Y2 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Sox11Q7M6Y2 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Sox11Q7M6Y2 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC21.72■■□□□ 1.07
Sox11Q7M6Y2 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Sox11Q7M6Y2 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
Sox11Q7M6Y2 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Sox11Q7M6Y2 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC21.72■■□□□ 1.07
Sox11Q7M6Y2 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC21.72■■□□□ 1.07
Sox11Q7M6Y2 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Sox11Q7M6Y2 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
Sox11Q7M6Y2 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Sox11Q7M6Y2 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Sox11Q7M6Y2 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Sox11Q7M6Y2 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Sox11Q7M6Y2 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Sox11Q7M6Y2 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Sox11Q7M6Y2 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Sox11Q7M6Y2 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
Sox11Q7M6Y2 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC21.7■■□□□ 1.06
Sox11Q7M6Y2 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC21.7■■□□□ 1.06
Sox11Q7M6Y2 Appbp2os-202ENSMUST00000206972 447 ntBASIC21.7■■□□□ 1.06
Sox11Q7M6Y2 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC21.7■■□□□ 1.06
Sox11Q7M6Y2 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Sox11Q7M6Y2 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC21.7■■□□□ 1.06
Sox11Q7M6Y2 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Sox11Q7M6Y2 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Sox11Q7M6Y2 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Sox11Q7M6Y2 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC21.69■■□□□ 1.06
Sox11Q7M6Y2 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Sox11Q7M6Y2 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Sox11Q7M6Y2 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Sox11Q7M6Y2 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Sox11Q7M6Y2 Gm12821-201ENSMUST00000120022 600 ntBASIC21.68■■□□□ 1.06
Sox11Q7M6Y2 Gm10399-202ENSMUST00000202768 748 ntBASIC21.68■■□□□ 1.06
Sox11Q7M6Y2 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Sox11Q7M6Y2 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC21.68■■□□□ 1.06
Sox11Q7M6Y2 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Sox11Q7M6Y2 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Sox11Q7M6Y2 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Sox11Q7M6Y2 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Sox11Q7M6Y2 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC21.67■■□□□ 1.06
Sox11Q7M6Y2 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Sox11Q7M6Y2 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC21.67■■□□□ 1.06
Sox11Q7M6Y2 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Sox11Q7M6Y2 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
Sox11Q7M6Y2 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Sox11Q7M6Y2 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Sox11Q7M6Y2 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Sox11Q7M6Y2 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
Sox11Q7M6Y2 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
Sox11Q7M6Y2 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Sox11Q7M6Y2 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Sox11Q7M6Y2 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Sox11Q7M6Y2 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Sox11Q7M6Y2 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC21.65■■□□□ 1.06
Sox11Q7M6Y2 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms