Protein–RNA interactions for Protein: Q6Q899

Ddx58, Probable ATP-dependent RNA helicase DDX58, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx58Q6Q899 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Ddx58Q6Q899 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Ddx58Q6Q899 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC26.8■■□□□ 1.88
Ddx58Q6Q899 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC26.8■■□□□ 1.88
Ddx58Q6Q899 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC26.8■■□□□ 1.88
Ddx58Q6Q899 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC26.79■■□□□ 1.88
Ddx58Q6Q899 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Ddx58Q6Q899 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC26.79■■□□□ 1.88
Ddx58Q6Q899 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Ddx58Q6Q899 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Ddx58Q6Q899 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Ddx58Q6Q899 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC26.78■■□□□ 1.88
Ddx58Q6Q899 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Ddx58Q6Q899 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
Ddx58Q6Q899 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC26.78■■□□□ 1.88
Ddx58Q6Q899 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC26.78■■□□□ 1.88
Ddx58Q6Q899 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC26.78■■□□□ 1.88
Ddx58Q6Q899 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC26.78■■□□□ 1.88
Ddx58Q6Q899 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC26.78■■□□□ 1.88
Ddx58Q6Q899 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Ddx58Q6Q899 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC26.77■■□□□ 1.88
Ddx58Q6Q899 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC26.77■■□□□ 1.88
Ddx58Q6Q899 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC26.77■■□□□ 1.88
Ddx58Q6Q899 Il17rd-202ENSMUST00000223942 2186 ntBASIC26.76■■□□□ 1.87
Ddx58Q6Q899 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Ddx58Q6Q899 Gm7417-201ENSMUST00000192950 473 ntBASIC26.76■■□□□ 1.87
Ddx58Q6Q899 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC26.76■■□□□ 1.87
Ddx58Q6Q899 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Ddx58Q6Q899 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Ddx58Q6Q899 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC26.76■■□□□ 1.87
Ddx58Q6Q899 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC26.75■■□□□ 1.87
Ddx58Q6Q899 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Ddx58Q6Q899 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Ddx58Q6Q899 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
Ddx58Q6Q899 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Ddx58Q6Q899 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Ddx58Q6Q899 Gm40881-201ENSMUST00000223397 166 ntBASIC26.74■■□□□ 1.87
Ddx58Q6Q899 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Ddx58Q6Q899 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC26.74■■□□□ 1.87
Ddx58Q6Q899 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC26.73■■□□□ 1.87
Ddx58Q6Q899 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Ddx58Q6Q899 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Ddx58Q6Q899 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC26.73■■□□□ 1.87
Ddx58Q6Q899 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC26.73■■□□□ 1.87
Ddx58Q6Q899 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Ddx58Q6Q899 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Ddx58Q6Q899 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC26.72■■□□□ 1.87
Ddx58Q6Q899 Gm10399-202ENSMUST00000202768 748 ntBASIC26.72■■□□□ 1.87
Ddx58Q6Q899 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC26.72■■□□□ 1.87
Ddx58Q6Q899 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Ddx58Q6Q899 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Ddx58Q6Q899 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
Ddx58Q6Q899 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC26.71■■□□□ 1.87
Ddx58Q6Q899 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
Ddx58Q6Q899 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC26.7■■□□□ 1.87
Ddx58Q6Q899 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
Ddx58Q6Q899 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC26.7■■□□□ 1.86
Ddx58Q6Q899 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC26.7■■□□□ 1.86
Ddx58Q6Q899 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
Ddx58Q6Q899 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Ddx58Q6Q899 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Ddx58Q6Q899 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Ddx58Q6Q899 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Ddx58Q6Q899 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
Ddx58Q6Q899 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
Ddx58Q6Q899 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC26.68■■□□□ 1.86
Ddx58Q6Q899 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC26.68■■□□□ 1.86
Ddx58Q6Q899 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Ddx58Q6Q899 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC26.68■■□□□ 1.86
Ddx58Q6Q899 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Ddx58Q6Q899 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC26.68■■□□□ 1.86
Ddx58Q6Q899 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC26.67■■□□□ 1.86
Ddx58Q6Q899 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Ddx58Q6Q899 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC26.67■■□□□ 1.86
Ddx58Q6Q899 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC26.67■■□□□ 1.86
Ddx58Q6Q899 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Ddx58Q6Q899 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC26.67■■□□□ 1.86
Ddx58Q6Q899 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC26.67■■□□□ 1.86
Ddx58Q6Q899 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC26.67■■□□□ 1.86
Ddx58Q6Q899 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
Ddx58Q6Q899 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC26.66■■□□□ 1.86
Ddx58Q6Q899 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Ddx58Q6Q899 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Ddx58Q6Q899 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Ddx58Q6Q899 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC26.65■■□□□ 1.86
Ddx58Q6Q899 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Ddx58Q6Q899 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Ddx58Q6Q899 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
Ddx58Q6Q899 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
Ddx58Q6Q899 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC26.64■■□□□ 1.86
Ddx58Q6Q899 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC26.64■■□□□ 1.86
Ddx58Q6Q899 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC26.64■■□□□ 1.86
Ddx58Q6Q899 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC26.63■■□□□ 1.85
Ddx58Q6Q899 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Ddx58Q6Q899 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC26.63■■□□□ 1.85
Ddx58Q6Q899 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
Ddx58Q6Q899 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC26.62■■□□□ 1.85
Ddx58Q6Q899 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC26.62■■□□□ 1.85
Ddx58Q6Q899 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
Ddx58Q6Q899 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Retrieved 100 of 76,532 protein–RNA pairs in 606.4 ms