Protein–RNA interactions for Protein: Q6NZL8

Scube1, Signal peptide, CUB and EGF-like domain-containing protein 1, mousemouse

Predictions only

Length 1,018 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube1Q6NZL8 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Scube1Q6NZL8 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Scube1Q6NZL8 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
Scube1Q6NZL8 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Scube1Q6NZL8 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC20.52■□□□□ 0.88
Scube1Q6NZL8 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Scube1Q6NZL8 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Scube1Q6NZL8 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Scube1Q6NZL8 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Scube1Q6NZL8 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.51■□□□□ 0.87
Scube1Q6NZL8 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Scube1Q6NZL8 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Scube1Q6NZL8 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Scube1Q6NZL8 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Scube1Q6NZL8 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Scube1Q6NZL8 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Scube1Q6NZL8 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Scube1Q6NZL8 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Scube1Q6NZL8 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.49■□□□□ 0.87
Scube1Q6NZL8 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Scube1Q6NZL8 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Scube1Q6NZL8 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Scube1Q6NZL8 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Scube1Q6NZL8 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Scube1Q6NZL8 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Scube1Q6NZL8 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Scube1Q6NZL8 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Scube1Q6NZL8 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Scube1Q6NZL8 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.47■□□□□ 0.87
Scube1Q6NZL8 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.47■□□□□ 0.87
Scube1Q6NZL8 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Scube1Q6NZL8 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Scube1Q6NZL8 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Scube1Q6NZL8 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Scube1Q6NZL8 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Scube1Q6NZL8 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Scube1Q6NZL8 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Scube1Q6NZL8 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Scube1Q6NZL8 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Scube1Q6NZL8 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC20.46■□□□□ 0.87
Scube1Q6NZL8 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Scube1Q6NZL8 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Scube1Q6NZL8 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.45■□□□□ 0.86
Scube1Q6NZL8 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Scube1Q6NZL8 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Scube1Q6NZL8 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Scube1Q6NZL8 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Scube1Q6NZL8 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Scube1Q6NZL8 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Scube1Q6NZL8 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Scube1Q6NZL8 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Scube1Q6NZL8 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Scube1Q6NZL8 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Scube1Q6NZL8 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Scube1Q6NZL8 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Scube1Q6NZL8 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Scube1Q6NZL8 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Scube1Q6NZL8 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Scube1Q6NZL8 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.43■□□□□ 0.86
Scube1Q6NZL8 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Scube1Q6NZL8 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC20.43■□□□□ 0.86
Scube1Q6NZL8 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.43■□□□□ 0.86
Scube1Q6NZL8 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Scube1Q6NZL8 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Scube1Q6NZL8 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Scube1Q6NZL8 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Scube1Q6NZL8 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Scube1Q6NZL8 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Scube1Q6NZL8 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Scube1Q6NZL8 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Scube1Q6NZL8 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Scube1Q6NZL8 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Scube1Q6NZL8 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Scube1Q6NZL8 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Scube1Q6NZL8 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Scube1Q6NZL8 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Scube1Q6NZL8 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Scube1Q6NZL8 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Scube1Q6NZL8 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Scube1Q6NZL8 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Scube1Q6NZL8 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Scube1Q6NZL8 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Scube1Q6NZL8 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Scube1Q6NZL8 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC20.4■□□□□ 0.86
Scube1Q6NZL8 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Scube1Q6NZL8 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Scube1Q6NZL8 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Scube1Q6NZL8 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Scube1Q6NZL8 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Scube1Q6NZL8 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.39■□□□□ 0.85
Scube1Q6NZL8 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Scube1Q6NZL8 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Scube1Q6NZL8 AC167019.3-201ENSMUST00000228225 1266 ntBASIC20.39■□□□□ 0.85
Scube1Q6NZL8 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Scube1Q6NZL8 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Scube1Q6NZL8 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC20.38■□□□□ 0.85
Scube1Q6NZL8 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Scube1Q6NZL8 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Scube1Q6NZL8 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.38■□□□□ 0.85
Scube1Q6NZL8 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms