Protein–RNA interactions for Protein: Q62247

Sox16, Protein SOX-16 (Fragment), mousemouse

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox16Q62247 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sox16Q62247 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sox16Q62247 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC12.37□□□□□ -0.43
Sox16Q62247 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sox16Q62247 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sox16Q62247 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sox16Q62247 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sox16Q62247 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Sox16Q62247 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC12.36□□□□□ -0.43
Sox16Q62247 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sox16Q62247 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Sox16Q62247 Gm20100-201ENSMUST00000209418 2272 ntBASIC12.36□□□□□ -0.43
Sox16Q62247 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Sox16Q62247 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sox16Q62247 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox16Q62247 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox16Q62247 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox16Q62247 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox16Q62247 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox16Q62247 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Sox16Q62247 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC12.34□□□□□ -0.43
Sox16Q62247 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox16Q62247 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox16Q62247 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
Sox16Q62247 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC12.34□□□□□ -0.43
Sox16Q62247 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox16Q62247 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox16Q62247 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox16Q62247 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
Sox16Q62247 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox16Q62247 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox16Q62247 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Sox16Q62247 H3f3aos-201ENSMUST00000097448 2905 ntBASIC12.34□□□□□ -0.43
Sox16Q62247 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox16Q62247 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox16Q62247 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC12.33□□□□□ -0.44
Sox16Q62247 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox16Q62247 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox16Q62247 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC12.33□□□□□ -0.44
Sox16Q62247 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox16Q62247 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox16Q62247 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox16Q62247 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox16Q62247 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox16Q62247 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox16Q62247 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox16Q62247 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sox16Q62247 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC12.32□□□□□ -0.44
Sox16Q62247 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sox16Q62247 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sox16Q62247 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sox16Q62247 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Sox16Q62247 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Sox16Q62247 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sox16Q62247 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Sox16Q62247 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sox16Q62247 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Sox16Q62247 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Sox16Q62247 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Sox16Q62247 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Sox16Q62247 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Sox16Q62247 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sox16Q62247 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox16Q62247 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox16Q62247 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Sox16Q62247 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC12.3□□□□□ -0.44
Sox16Q62247 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox16Q62247 Gm37415-201ENSMUST00000192265 2054 ntBASIC12.3□□□□□ -0.44
Sox16Q62247 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox16Q62247 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox16Q62247 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Sox16Q62247 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC12.3□□□□□ -0.44
Sox16Q62247 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Sox16Q62247 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox16Q62247 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox16Q62247 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox16Q62247 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox16Q62247 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox16Q62247 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox16Q62247 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Sox16Q62247 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Sox16Q62247 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Sox16Q62247 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox16Q62247 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox16Q62247 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox16Q62247 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox16Q62247 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox16Q62247 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox16Q62247 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox16Q62247 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox16Q62247 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox16Q62247 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Sox16Q62247 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox16Q62247 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox16Q62247 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox16Q62247 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox16Q62247 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox16Q62247 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sox16Q62247 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Sox16Q62247 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 11.7 ms